Single-cell transcriptomics unveils gene regulatory network plasticity

被引：0
|
作者：
Giovanni Iacono
Ramon Massoni-Badosa
Holger Heyn
机构：
[1] The Barcelona Institute of Science and Technology,CNAG
[2] Universitat Pompeu Fabra (UPF),CRG, Centre for Genomic Regulation (CRG)
来源：
Genome Biology | / 20卷
关键词：
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [41] scSGL: kernelized signed graph learning for single-cell gene regulatory network inference
    Karaaslanli, Abdullah
    Saha, Satabdi
    Aviyente, Selin
    Maiti, Tapabrata
    BIOINFORMATICS, 2022, 38 (11) : 3011 - 3019
  • [42] Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data
    Aditya Pratapa
    Amogh P. Jalihal
    Jeffrey N. Law
    Aditya Bharadwaj
    T. M. Murali
    Nature Methods, 2020, 17 : 147 - 154
  • [43] Single-cell Transcriptomic Studies Unveil Potential Nodes of the Notochord Gene Regulatory Network
    Negron-Pineiro, Lenny J.
    Di Gregorio, Anna
    INTEGRATIVE AND COMPARATIVE BIOLOGY, 2024, 64 (05) : 1194 - 1213
  • [44] Dictys: dynamic gene regulatory network dissects developmental continuum with single-cell multiomics
    Lingfei Wang
    Nikolaos Trasanidis
    Ting Wu
    Guanlan Dong
    Michael Hu
    Daniel E. Bauer
    Luca Pinello
    Nature Methods, 2023, 20 : 1368 - 1378
  • [45] Dissecting and improving gene regulatory network inference using single-cell transcriptome data
    Xue, Lingfeng
    Wu, Yan
    Lin, Yihan
    GENOME RESEARCH, 2023, 33 (09) : 1609 - 1621
  • [46] Inferring gene regulatory network from single-cell transcriptomes with graph autoencoder model
    Wang, Jiacheng
    Chen, Yaojia
    Zou, Quan
    PLOS GENETICS, 2023, 19 (09):
  • [47] Analyzing the gene regulatory network in hepatitis B patients by single-cell ATAC sequencing
    Xu, Huixuan
    Yu, Haiyan
    Zheng, Fengping
    Zhang, Cantong
    Cai, Wanxia
    Zhang, Xinzhou
    Tang, Donge
    Dai, Yong
    CLINICAL RHEUMATOLOGY, 2022, 41 (11) : 3513 - 3524
  • [48] Analyzing the gene regulatory network in hepatitis B patients by single-cell ATAC sequencing
    Huixuan Xu
    Haiyan Yu
    Fengping Zheng
    Cantong Zhang
    Wanxia Cai
    Xinzhou Zhang
    Donge Tang
    Yong Dai
    Clinical Rheumatology, 2022, 41 : 3513 - 3524
  • [49] Inferring single-cell gene regulatory network by non-redundant mutual information
    Zeng, Yanping
    He, Yongxin
    Zheng, Ruiqing
    Li, Min
    BRIEFINGS IN BIOINFORMATICS, 2023, 24 (05)
  • [50] Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data
    Pratapa, Aditya
    Jalihal, Amogh P.
    Law, Jeffrey N.
    Bharadwaj, Aditya
    Murali, T. M.
    NATURE METHODS, 2020, 17 (02) : 147 - +
12345