An Efficiency and Fast Algorithm Based on Gene Expressing Data Biclustering

被引：0

作者：

Liu Wei ^{[1
]}

Qu Bo ^{[1
]}

Yang Zhong-xue ^{[1
]}

Chen Ling ^{[2
]}

机构：

[1] Nanjing Xiaozhuang Univ, Sch Informat Technol, Nanjing, Peoples R China

[2] Nanjing Univ Aeronaut & Astronaut, Inst Informat Sci & Technol, Nanjing, Peoples R China

来源：

2009 WRI WORLD CONGRESS ON SOFTWARE ENGINEERING, VOL 2, PROCEEDINGS | 2009年

关键词：

D O I：

10.1109/WCSE.2009.29

中图分类号：

TP31 [计算机软件];

学科分类号：

081202 ; 0835 ;

摘要：

Biclustering the gene expressing data is an important task in bioinformatics A parallel biclustering algorithm for gene expressing data is presented The algorithm starts from the data sets containing pair of rows and columns of the data matrix, and gets the biclusters by gradually adding columns and rows on the data sets A pruning technique is also proposed to reduce computing tune Experimental results show that our algorithm has superiority to other similar algorithms in terms of processing speed and quality of clustering

引用

页码：41 / +

页数：2

共 50 条

[31] An Overlapping Control-Biclustering Algorithm from Gene Expression Data
Nepomuceno, Juan A.
Troncoso, Alicia
Aguilar-Ruiz, Jesus S.
2009 9TH INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS DESIGN AND APPLICATIONS, 2009, : 1239 - +
[32] KMeans Greedy Search Hybrid Algorithm for Biclustering Gene Expression Data
Das, Shyama
Idicula, Sumam Mary
ADVANCES IN COMPUTATIONAL BIOLOGY, 2010, 680 : 181 - 188
[33] A New Binary Biclustering Algorithm Based on Weight Adjacency Difference Matrix for Analyzing Gene Expression Data
Chu, He-Ming
Kong, Xiang-Zhen
Liu, Jin-Xing
Zheng, Chun-Hou
Zhang, Han
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 20 (05) : 2802 - 2809
[34] POPBic: Pathway-Based Order Preserving Biclustering Algorithm Towards the Analysis of Gene Expression Data
Mandal, Koyel
Sarmah, Rosy
Bhattacharyya, Dhruba Kumar
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 18 (06) : 2659 - 2670
[35] HiBi - The Algorithm of Biclustering the Discrete Data
Michalak, Marcin
Lachor, Magdalena
Polanski, Andrzej
ARTIFICIAL INTELLIGENCE AND SOFT COMPUTING, ICAISC 2014, PT II, 2014, 8468 : 760 - 771
[36] A New Biclustering Algorithm for Time-Series Gene Expression Data Analysis
Xue, Yun
Liao, Zhengling
Li, Meihang
Luo, Jie
Hu, Xiaohui
Luo, Guiyin
Chen, Wen-Sheng
2014 TENTH INTERNATIONAL CONFERENCE ON COMPUTATIONAL INTELLIGENCE AND SECURITY (CIS), 2014, : 268 - 272
[37] Biclustering gene expression data by random projection based on bucketing
Liu, Juan
Liu, Feng
2008 INTERNATIONAL SPECIAL TOPIC CONFERENCE ON INFORMATION TECHNOLOGY AND APPLICATIONS IN BIOMEDICINE, VOLS 1 AND 2, 2008, : 322 - 325
[38] Improving an Evolutionary Multi-objective Algorithm for the Biclustering of Gene Expression Data
Brizuela, Carlos A.
Luna-Taylor, Jorge E.
Martinez-Perez, Israel
Guillen, Hugo A.
Rodriguez, David O.
Beltran-Verdugo, Armando
2013 IEEE CONGRESS ON EVOLUTIONARY COMPUTATION (CEC), 2013, : 221 - 228
[39] Gibbs Sampling Based Bayesian Biclustering of Gene Expression Data
Chen, Daoyuan
Liu, Qinyi
Meng, Jia
Su, Jionglong
2020 13TH INTERNATIONAL CONGRESS ON IMAGE AND SIGNAL PROCESSING, BIOMEDICAL ENGINEERING AND INFORMATICS (CISP-BMEI 2020), 2020, : 790 - 795
[40] ARBic: an all-round biclustering algorithm for analyzing gene expression data
Liu, Xiangyu
Yu, Ting
Zhao, Xiaoyu
Long, Chaoyi
Han, Renmin
Su, Zhengchang
Li, Guojun
NAR GENOMICS AND BIOINFORMATICS, 2023, 5 (01)

← 1 2 3 4 5 →