Dating first cases of COVID-19

被引:59
|
作者
Roberts, David L. [1 ]
Rossman, Jeremy S. [2 ,3 ]
Jaric, Ivan [4 ,5 ]
机构
[1] Univ Kent, Sch Anthropol & Conservat, Durrell Inst Conservat & Ecol, Marlowe Bldg, Canterbury, Kent, England
[2] Univ Kent, Sch Biosci, Canterbury, Kent, England
[3] Res Aid Networks, Chicago, IL USA
[4] Czech Acad Sci, Inst Hydrobiol, Biol Ctr, Ceske Budejovice, Czech Republic
[5] Univ South Bohemia, Fac Sci, Dept Ecosyst Biol, Ceske Budejovice, Czech Republic
关键词
INFERRING EXTINCTION; ESTIMATOR; ACCURACY;
D O I
10.1371/journal.ppat.1009620
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Author summary While the COVID-19 pandemic continues, questions still persist as to its origins. Evidence is building that its origin as a zoonotic spillover occurred before the officially accepted timing of early December, 2019. We date the origin of COVID-19 cases from 203 countries and territories using a model from conservation science. We use a method that was originally developed to date the timing of extinction, and turn it to date the timing of origination using case dates rather than sighting events. Our results suggest that the virus emerged in China in early October to mid-November, 2019 (the most likely date being November 17), and by January, 2020, had spread globally. This suggests a much earlier and more rapid spread than is evident from confirmed cases. In addition, our study provides a new approach for estimating dates of the arrival of infectious diseases in new areas that can be applied to many different situations in the future. Questions persist as to the origin of the COVID-19 pandemic. Evidence is building that its origin as a zoonotic spillover occurred prior to the officially accepted timing of early December, 2019. Here we provide novel methods to date the origin of COVID-19 cases. We show that six countries had exceptionally early cases, unlikely to represent part of their main case series. The model suggests a likely timing of the first case of COVID-19 in China as November 17 (95% CI October 4). Origination dates are discussed for the first five countries outside China and each continent. Results infer that SARS-CoV-2 emerged in China in early October to mid-November, and by January, had spread globally. This suggests an earlier and more rapid timeline of spread. Our study provides new approaches for estimating dates of the arrival of infectious diseases based on small samples that can be applied to many epidemiological situations.
引用
收藏
页数:10
相关论文
共 50 条
  • [21] The First Few Hundred Cases for Coronavirus Disease 2019 (COVID-19) in Colombia
    Felipe Porras-Villamil, Julian
    Javier Olivera, Mario
    Katherine Rios-Camargo, Nadia
    IRANIAN JOURNAL OF PUBLIC HEALTH, 2020, 49 : 48 - 56
  • [22] Treatments Administered to the First 9152 Reported Cases of COVID-19: A Systematic Review
    Fajgenbaum, David C.
    Khor, Johnson S.
    Gorzewski, Alexander
    Tamakloe, Mark-Avery
    Powers, Victoria
    Kakkis, Joseph J.
    Repasky, Mileva
    Taylor, Anne
    Beschloss, Alexander
    Hernandez-Miyares, Laura
    Go, Beatrice
    Nimgaonkar, Vivek
    McCarthy, Madison S.
    Kim, Casey J.
    Pai, Ruth-Anne Langan
    Frankl, Sarah
    Angelides, Philip
    Jiang, Joanna
    Rasheed, Rozena
    Napier, Erin
    Mackay, Duncan
    Pierson, Sheila K.
    INFECTIOUS DISEASES AND THERAPY, 2020, 9 (03) : 435 - 449
  • [23] First-wave COVID-19 daily cases obey gamma law
    Duchesne, Jean
    Coubard, Olivier A.
    INFECTIOUS DISEASE MODELLING, 2022, 7 (02) : 64 - 74
  • [24] Treatments Administered to the First 9152 Reported Cases of COVID-19: A Systematic Review
    David C. Fajgenbaum
    Johnson S. Khor
    Alexander Gorzewski
    Mark-Avery Tamakloe
    Victoria Powers
    Joseph J. Kakkis
    Mileva Repasky
    Anne Taylor
    Alexander Beschloss
    Laura Hernandez-Miyares
    Beatrice Go
    Vivek Nimgaonkar
    Madison S. McCarthy
    Casey J. Kim
    Ruth-Anne Langan Pai
    Sarah Frankl
    Philip Angelides
    Joanna Jiang
    Rozena Rasheed
    Erin Napier
    Duncan Mackay
    Sheila K. Pierson
    Infectious Diseases and Therapy, 2020, 9 : 435 - 449
  • [25] Clinical and virological data of the first cases of COVID-19 in Europe: a case series
    Lescure, Francois-Xavier
    Bouadma, Lila
    Duc Nguyen
    Parisey, Marion
    Wicky, Paul-Henri
    Behillil, Sylvie
    Gaymard, Alexandre
    Bouscambert-Duchamp, Maude
    Donati, Flora
    Le Hingrat, Quentin
    Enouf, Vincent
    Houhou-Fidouh, Nadhira
    Valette, Martine
    Mailles, Alexandra
    Lucet, Jean-Christophe
    Mentre, France
    Duval, Xavier
    Descamps, Diane
    Malvy, Denis
    Timsit, Jean-Francois
    Lina, Bruno
    Van-der-Werf, Sylvie
    Yazdanpanah, Yazdan
    LANCET INFECTIOUS DISEASES, 2020, 20 (06): : 697 - 706
  • [26] A weekly analysis of cases confirmed to COVID-19 in Cuba: first 70 days
    Rodriguez Monteagudo, Mabel Anay
    Avello Martinez, Raidell
    Morejon Giraldoni, Alain
    Rodriguez Monteagudo, Pavel
    Avello Rodriguez, Amanda
    MEDISUR-REVISTA DE CIENCIAS MEDICAS DE CIENFUEGOS, 2020, 18 (03): : 485 - 491
  • [27] Beyond virology: environmental constraints of the first wave of COVID-19 cases in Italy
    Mulder, Christian
    Conti, Erminia
    Saccone, Salvatore
    Federico, Concetta
    ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2021, 28 (24) : 31996 - 32004
  • [28] The Effect of Ivermectin on Cases of COVID-19*
    Annie, Frank H.
    Campbell, James
    Searls, Lauren
    Amos, Jessica
    CARDIOVASCULAR REVASCULARIZATION MEDICINE, 2022, 44 : 98 - 100
  • [29] Testing for COVID-19 cases in ASEAN
    Koh, David S. Q.
    Wong, Sheena X. M.
    Wong, Justin
    WESTERN PACIFIC SURVEILLANCE AND RESPONSE, 2020, 11 (04) : 43 - 45
  • [30] COVID-19 cases surge in Colombia
    Daniels, Joe Parkin
    LANCET, 2020, 396 (10246): : 227 - 227