Application of DNA Self-Assembly on 0-1 Integer Programming Problem

被引：5
|
作者：
Zhang, Xuncai [1 ,2 ]
Niu, Ying [1 ]
Cui, Guangzhao [1 ]
Xu, Jin [2 ]
机构：
[1] Zhengzhou Univ Light Ind, Coll Elect & Elect Engn, Zhengzhou 450002, Peoples R China
[2] Huazhong Univ Sci & Technol, Dept Control Sci & Engn, Wuhan 430074, Peoples R China
来源：
JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE | 2010年 / 7卷 / 01期
基金：
中国国家自然科学基金;
关键词：
Self-Assembly; 0-1 Integer Programming Problem; DNA Tile; Parallel Computing; DNA Computing; COMPUTATION;
D O I：
10.1166/jctn.2010.1341
中图分类号：
O6 [化学];
学科分类号：
0703 ;
摘要：
Self-assembly of DNA is an efficient method of executing parallel DNA computing where information is encoded in DNA tiles and a large number of tiles can be self-assembled via sticky end associations We investigate how basic ideas on tiling can be applied to solving 0-1 integer programming problem. It suggests that these procedures can be realized on the molecular scale through the medium of self-assembled DNA tiles. By creating billions of billions of copies of the participating DNA tiles, the algorithm will run in parallel on all possible solutions. The potential of DNA computing by self-assembly for the 0-1 integer programming problem is promising given the operational time complexity of O(m * n). This work shows further evidence for the ability of DNA computing to solve NP-complete problems
引用
收藏
页码：165 / 172
页数：8
相关论文
共 50 条
  • [11] Solving the 0-1 planning problem based on 3D DNA self-assembly technology
    Cao, Chong
    Zhang, Qiang
    Zhou, Shihua
    Zhou, Changjun
    NANOMEDICINE-NANOTECHNOLOGY BIOLOGY AND MEDICINE, 2016, 12 (02) : 556 - 556
  • [12] Solving the 0-1 Multi-objective Knapsack Problem Using Self-assembly of DNA Tiles
    Cheng, Zhen
    Huang, Yufang
    Chen, Zhihua
    Zhang, Xuncai
    Xu, Jin
    2009 FOURTH INTERNATIONAL CONFERENCE ON BIO-INSPIRED COMPUTING: THEORIES AND APPLICATIONS, PROCEEDINGS, 2009, : 137 - +
  • [13] APPLICATION OF 0-1 INTEGER PROGRAMMING TO MULTITARGET TRACKING PROBLEMS
    MOREFIELD, CL
    IEEE TRANSACTIONS ON AUTOMATIC CONTROL, 1977, 22 (03) : 302 - 312
  • [14] Solving 0-1 Integer Programming Problem Based on DNA Strand Displacement Reaction Network
    Tang, Zhen
    Yin, Zhixiang
    Wang, Luhui
    Cui, Jianzhong
    Yang, Jing
    Wang, Risheng
    ACS SYNTHETIC BIOLOGY, 2021, 10 (09): : 2318 - 2330
  • [15] THE 0-1 INTEGER PROGRAMMING PROBLEM IN A FINITE RING WITH IDENTITY.
    Rice, Bart
    Computers & mathematics with applications, 1981, 7 (06): : 447 - 450
  • [16] AN APPROXIMATE METHOD FOR MIXED 0-1 INTEGER PROGRAMMING AND ITS APPLICATION
    HARA, H
    YUGAMI, N
    OHTA, Y
    FUJITSU SCIENTIFIC & TECHNICAL JOURNAL, 1994, 30 (01): : 75 - 83
  • [17] A HEURISTIC 0-1 INTEGER PROGRAMMING METHOD
    BAESSLER, F
    OR SPEKTRUM, 1992, 14 (01) : 11 - 18
  • [18] A microfluidic systems-based DNA algorithm for solving special 0-1 integer programming problem
    Li, Wanggen
    Ding, Yongsheng
    APPLIED MATHEMATICS AND COMPUTATION, 2007, 185 (02) : 1160 - 1170
  • [19] The Magnetic Bead Computing Model of the 0-1 Integer Programming Problem Based on DNA Cycle Hybridization
    Xu, Rujie
    Yin, Zhixiang
    Tang, Zhen
    Yang, Jing
    Cui, Jianzhong
    Wang, Xiyuan
    MATHEMATICAL PROBLEMS IN ENGINEERING, 2021, 2021
  • [20] A 0-1 integer programming model and solving strategies for the slab storage problem
    Lu, Chao
    Zhang, Ruiyou
    Liu, Shixin
    INTERNATIONAL JOURNAL OF PRODUCTION RESEARCH, 2016, 54 (08) : 2366 - 2376
12345