Solution structure of the chick TGFβ type II receptor ligand-binding domain

被引:8
|
作者
Marlow, MS
Brown, CB
Barnett, JV
Krezel, AM
机构
[1] Vanderbilt Univ, Dept Biol Sci, Nashville, TN 37232 USA
[2] Vanderbilt Univ, Dept Pharmacol, Nashville, TN 37232 USA
关键词
TGF beta; type II receptor; ligand binding; domain; NMR;
D O I
10.1016/S0022-2836(03)00023-8
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The transforming growth factor beta (TGFbeta) signaling pathway influences cell proliferation, immune responses, and extracellular matrix reorganization throughout the vertebrate life cycle. The signaling cascade is initiated by ligand-binding to its cognate type 11 receptor. Here, we present the structure of the chick type II TGFbeta receptor determined by solution NMR methods. Distance and angular constraints were derived from N-15 and C-13 edited NMR experiments. Torsion angle dynamics was used throughout the structure calculations and refinement. The 20 final structures were energy minimized using the generalized Born solvent model. For these 20 structures, the average backbone root-mean-square distance from the average structure is below 0.6 Angstrom. The overall fold of this 109-residue domain is conserved within the superfamily of these receptors. Chick receptors fully recognize and respond to human TGFbeta ligands despite only 60% identity at the sequence level. Comparison with the human TGFbeta receptor determined by X-ray crystallography reveals different conformations in several regions. Sequence divergence and crystal packing interactions under low pH conditions are likely causes. This solution structure identifies regions were structural changes, however subtle, may occur upon ligand-binding. We also identified two very well conserved molecular surfaces. One was found to bind ligand in the crystallized human TGFbeta3:TGFbeta type 11 receptor complex. The other, newly identified area can be the interaction site with type I and/or type Ill receptors of the TGFbeta signaling complex. (C) 2003 Elsevier Science Ltd. All rights reserved.
引用
收藏
页码:989 / 997
页数:9
相关论文
共 50 条
  • [11] Solution structure and backbone dynamics of the TGFβ type II receptor extracellular domain
    Deep, S
    Walker, KP
    Shu, ZY
    Hinck, AP
    BIOCHEMISTRY, 2003, 42 (34) : 10126 - 10139
  • [12] The X-ray structure of a hemipteran ecdysone receptor ligand-binding domain - Comparison with a Lepidopteran ecdysone receptor ligand-binding domain and implications for insecticide design
    Carmichael, JA
    Lawrence, MC
    Graham, LD
    Pilling, PA
    Epa, VC
    Noyce, L
    Lovrecz, G
    Winkler, DA
    Pawlak-Skrzecz, A
    Eaton, RE
    Hannan, GN
    Hill, RJ
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (23) : 22258 - 22269
  • [13] Site-directed mutagenesis of the type II TGF-β receptor indicates a ligand-binding site distinct from that of the type II activin receptor
    Guimond, A
    Sulea, T
    Pen, A
    Ear, P
    O'Connor-McCourt, MD
    FEBS LETTERS, 2002, 515 (1-3) : 13 - 19
  • [14] Solution Nuclear Magnetic Resonance Studies of the Ligand-Binding Domain of an Orphan Nuclear Receptor Reveal a Dynamic Helix in the Ligand-Binding Pocket
    Daffern, Nicolas
    Chen, Zhonglei
    Zhang, Yongbo
    Pick, Leslie
    Radhakrishnan, Ishwar
    BIOCHEMISTRY, 2018, 57 (13) : 1977 - 1986
  • [15] The 2.7 Å structure of AChBP, homologue of the ligand-binding domain of the nicotinic acetylcholine receptor
    Brejc, K
    van Dijk, WJ
    Smit, AB
    Sixma, TK
    ION CHANNELS: FROM ATOMIC RESOLUTION PHYSIOLOGY TO FUNCTIONAL GENOMICS, 2002, 245 : 22 - 32
  • [16] Structure and function of AChBP, homologue of the ligand-binding domain of the nicotinic acetylcholine receptor
    Smit, AB
    Brejc, K
    Syed, N
    Sixma, TK
    MYASTHENIA GRAVIS AND RELATED DISORDERS: BIOCHEMICAL BASIS FOR DISEASE OF THE NEUROMUSCULAR JUNCTION, 2003, 998 : 81 - 92
  • [17] The molecular structure of the Toll-like receptor 3 ligand-binding domain
    Bell, JK
    Botos, I
    Hall, PR
    Askins, J
    Shiloach, J
    Segal, DM
    Davies, DR
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (31) : 10976 - 10980
  • [18] Crystal Structure of the Vitamin D Receptor Ligand-Binding Domain with Lithocholic Acids
    Ikura, Teikichi
    Ito, Nobutoshi
    VITAMIN D HORMONE, 2016, 100 : 117 - 136
  • [19] The nuclear receptor ligand-binding domain: A family-based structure analysis
    Folkertsma, S
    van Noort, PI
    Brandt, RFJ
    Bettler, E
    Vriend, G
    de Vlieg, J
    CURRENT MEDICINAL CHEMISTRY, 2005, 12 (09) : 1001 - 1016
  • [20] Structure of the ligand-binding domain of the EphB2 receptor at 2 Å resolution
    Goldgur, Yehuda
    Paavilainen, Sari
    Nikolov, Dimitar
    Himanen, J. P.
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2009, 65 : 71 - 74