Additive Interactions Between Susceptibility Single-Nucleotide Polymorphisms Identified in Genome-Wide Association Studies and Breast Cancer Risk Factors in the Breast and Prostate Cancer Cohort Consortium

被引:37
|
作者
Joshi, Amit D. [1 ,3 ]
Lindstrom, Sara [1 ]
Husing, Anika [2 ]
Barrdahl, Myrto [2 ]
VanderWeele, Tyler J. [3 ,5 ]
Campa, Daniele [4 ,6 ]
Canzian, Federico [6 ]
Gaudet, Mia M. [7 ]
Figueroa, Jonine D. [8 ]
Baglietto, Laura [9 ,10 ]
Berg, Christine D. [11 ]
Buring, Julie E. [12 ,13 ]
Chanock, Stephen J. [8 ]
Chirlaque, Maria-Dolores [14 ,15 ]
Diver, W. Ryan [16 ]
Dossus, Laure [17 ,18 ]
Giles, Graham G. [9 ,10 ,19 ]
Haiman, Christopher A. [20 ]
Hankinson, Susan E. [21 ]
Henderson, Brian E. [20 ]
Hoover, Robert N. [8 ]
Hunter, David J. [1 ]
Isaacs, Claudine [22 ]
Kaaks, Rudolf [2 ]
Kolonel, Laurence N. [23 ]
Krogh, Vittorio [24 ]
Le Marchand, Loic [25 ]
Lee, I-Min [12 ,13 ]
Lund, Eiliv [26 ]
McCarty, Catherine A. [27 ]
Overvad, Kim [28 ]
Peeters, Petra H. [29 ,30 ]
Riboli, Elio [30 ]
Schumacher, Fredrick [20 ]
Severi, Gianluca [9 ,10 ]
Stram, Daniel O. [20 ]
Sund, Malin [31 ]
Thun, Michael J. [16 ]
Travis, Ruth C. [32 ]
Trichopoulos, Dimitrios [3 ,33 ,34 ]
Willett, Walter C. [35 ]
Zhang, Shumin [12 ,13 ]
Ziegler, Regina G. [8 ]
Kraft, Peter [1 ,3 ]
机构
[1] Harvard Univ, Program Genet Epidemiol & Stat Genet, Sch Publ Hlth, Boston, MA 02115 USA
[2] German Canc Res Ctr, Div Canc Epidemiol, Heidelberg, Germany
[3] Harvard Univ, Dept Epidemiol, Sch Publ Hlth, Boston, MA 02115 USA
[4] Univ Pisa, Dept Biol, Pisa, Italy
[5] Harvard Univ, Dept Biostat, Sch Publ Hlth, Boston, MA 02115 USA
[6] German Canc Res Ctr, Genom Epidemiol Grp, Heidelberg, Germany
[7] Amer Canc Soc, Genet Epidemiol Unit, Atlanta, GA 30329 USA
[8] NCI, Div Canc Epidemiol & Genet, Bethesda, MD 20892 USA
[9] Canc Council Victoria, Canc Epidemiol Ctr, Carlton, Vic, Australia
[10] Univ Melbourne, Ctr Mol Environm Genet & Analyt Epidemiol, Sch Populat Hlth, Melbourne, Vic, Australia
[11] NCI, Div Canc Prevent, Bethesda, MD 20892 USA
[12] Brigham & Womens Hosp, Div Prevent Med, Boston, MA 02115 USA
[13] Harvard Univ, Sch Med, Boston, MA 02115 USA
[14] Murcia Reg Hlth Council, Dept Epidemiol, Murcia, Spain
[15] Consorcio Invest Biomed Epidemiol & Salud Publ, Madrid, Spain
[16] Amer Canc Soc, Epidemiol Res Program, Atlanta, GA 30329 USA
[17] Inst Gustave Roussy, INSERM, Ctr Res Epidemiol & Populat Hlth, U1018, F-94805 Villejuif, France
[18] Paris South Univ, Unite Mixte Rech Sante 1018, Villejuif, France
[19] Monash Univ, Fac Med, Melbourne, Vic 3004, Australia
[20] Univ So Calif, Keck Sch Med, Dept Prevent Med, Los Angeles, CA 90033 USA
[21] Univ Massachusetts, Div Biostat & Epidemiol, Sch Publ Hlth & Hlth Sci, Amherst, MA 01003 USA
[22] Georgetown Univ, Lombardi Comprehens Canc Ctr, Washington, DC USA
[23] Univ Hawaii, Canc Res Ctr, Program Epidemiol, Honolulu, HI 96813 USA
[24] Fdn IRCCS Ist Nazl Tumori, Epidemiol & Prevent Unit, Milan, Italy
[25] Univ Hawaii, Ctr Canc, Honolulu, HI 96822 USA
[26] Univ Tromso, Inst Community Med, Tromso, Norway
[27] Essentia Inst Rural Hlth, Duluth, MN USA
[28] Aarhus Univ, Epidemiol Sect, Dept Publ Hlth, Aarhus, Denmark
[29] Univ Med Ctr Utrecht, Dept Epidemiol, Julius Ctr Hlth Sci & Primary Care, Utrecht, Netherlands
[30] Univ London Imperial Coll Sci Technol & Med, Sch Publ Hlth, Fac Med, Dept Epidemiol & Biostat, London, England
[31] Umea Univ Hosp, Dept Surg, S-90185 Umea, Sweden
[32] Univ Oxford, Nuffield Dept Clin Med, Canc Epidemiol Unit, Oxford, England
[33] Hellen Hlth Fdn, Athens, Greece
[34] Acad Athens, Bur Epidemiol Res, Athens, Greece
[35] Harvard Univ, Dept Nutr, Sch Publ Hlth, Boston, MA 02115 USA
基金
美国国家卫生研究院;
关键词
additive interactions; breast cancer; genome-wide association studies; single-nucleotide polymorphisms; COMMON VARIANTS; CONFER SUSCEPTIBILITY; CONFIDENCE-INTERVALS; LIFE-STYLE; PREDICTION; ALLELES; LOCI; PREVENTION; RAD51L1; MODELS;
D O I
10.1093/aje/kwu214
中图分类号
R1 [预防医学、卫生学];
学科分类号
1004 ; 120402 ;
摘要
Additive interactions can have public health and etiological implications but are infrequently reported. We assessed departures from additivity on the absolute risk scale between 9 established breast cancer risk factors and 23 susceptibility single-nucleotide polymorphisms (SNPs) identified from genome-wide association studies among 10,146 non-Hispanic white breast cancer cases and 12,760 controls within the National Cancer Institute's Breast and Prostate Cancer Cohort Consortium. We estimated the relative excess risk due to interaction and its 95% confidence interval for each pairwise combination of SNPs and nongenetic risk factors using age- and cohort-adjusted logistic regression models. After correction for multiple comparisons, we identified a statistically significant relative excess risk due to interaction (uncorrected P = 4.51 x 10(-5)) between a SNP in the DNA repair protein RAD51 homolog 2 gene (RAD51L1; rs10483813) and body mass index (weight (kg)/height (m)(2)). We also compared additive and multiplicative polygenic risk prediction models using per-allele odds ratio estimates from previous studies for breast-cancer susceptibility SNPs and observed that the multiplicative model had a substantially better goodness of fit than the additive model.
引用
收藏
页码:1018 / 1027
页数:10
相关论文
共 50 条
  • [21] Genome-wide association studies of breast cancer prognosis
    Schmidt, Marjanka K.
    Guo, Qi
    Dork, Thilo
    Eccles, Diana
    Keeman, Renske
    Simard, Jacques
    Kraft, Peter
    Easton, Douglas F.
    Pharoah, Paul D.
    CANCER RESEARCH, 2017, 77
  • [22] Polygenic Modeling of Genome-Wide Association Studies: An Application to Prostate and Breast Cancer
    Witte, John S.
    Hoffmann, Thomas J.
    OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, 2011, 15 (06) : 393 - U66
  • [23] Increasing Power of Genome-Wide Association Studies by Collecting Additional Single-Nucleotide Polymorphisms
    Kostem, Emrah
    Lozano, Jose A.
    Eskin, Eleazar
    GENETICS, 2011, 188 (02) : 449 - 460
  • [24] Single-nucleotide polymorphisms in PSCA and the risk of breast cancer in a Chinese population
    Wang, Meng
    Wang, Xijing
    Fu, Sidney W.
    Liu, Xinghan
    Jin, Tianbo
    Kang, Huafeng
    Ma, Xiaobin
    Lin, Shuai
    Guan, Haitao
    Zhang, Shuqun
    Liu, Kang
    Dai, Cong
    Zhu, Yuyao
    Dai, Zhijun
    ONCOTARGET, 2016, 7 (19) : 27665 - 27675
  • [25] Tagging single-nucleotide polymorphisms in antioxidant defense enzymes and susceptibility to breast cancer
    Cebrian, A
    Pharoah, PD
    Ahmed, S
    Smith, PL
    Luccarini, C
    Luben, R
    Redman, K
    Munday, H
    Easton, DF
    Dunning, AM
    Ponder, BAJ
    CANCER RESEARCH, 2006, 66 (02) : 1225 - 1233
  • [27] Genome wide association studies for breast and prostate cancer susceptibility loci in the CGEMS initiative
    Thomas, G.
    Hoover, R.
    Hunter, D.
    Chanock, S.
    EJC SUPPLEMENTS, 2008, 6 (09): : 64 - 64
  • [28] Association of Type 2 Diabetes Susceptibility Variants With Advanced Prostate Cancer Risk in the Breast and Prostate Cancer Cohort Consortium
    Machiela, Mitchell J.
    Lindstroem, Sara
    Allen, Naomi E.
    Haiman, Christopher A.
    Albanes, Demetrius
    Barricarte, Aurelio
    Berndt, Sonja I.
    Bueno-de-Mesquita, H. Bas
    Chanock, Stephen
    Gaziano, J. Michael
    Gapstur, Susan M.
    Giovannucci, Edward
    Henderson, Brian E.
    Jacobs, Eric J.
    Kolonel, Laurence N.
    Krogh, Vittorio
    Ma, Jing
    Stampfer, Meir J.
    Stevens, Victoria L.
    Stram, Daniel O.
    Tjonneland, Anne
    Travis, Ruth
    Willett, Walter C.
    Hunter, David J.
    Le Marchand, Loic
    Kraft, Peter
    AMERICAN JOURNAL OF EPIDEMIOLOGY, 2012, 176 (12) : 1121 - 1129
  • [29] Association of Single-Nucleotide Polymorphisms of CD44 Gene with Susceptibility to Breast Cancer in Chinese Women
    Lin, Xiao
    You, Xiaojing
    Cao, Xuezhen
    Pan, Shenghua
    MEDICAL SCIENCE MONITOR, 2018, 24 : 3077 - 3083
  • [30] Single-nucleotide polymorphisms in DNA repair genes and association with breast cancer risk in the web study
    Roberts, Michelle R.
    Shields, Peter G.
    Ambrosone, Christine B.
    Nie, Jing
    Marian, Catalin
    Krishnan, Shiva S.
    Goerlitz, David S.
    Modali, Ramakrishna
    Seddon, Michael
    Lehman, Teresa
    Amend, Kandace L.
    Trevisan, Maurizio
    Edge, Stephen B.
    Freudenheim, Jo L.
    CARCINOGENESIS, 2011, 32 (08) : 1223 - 1230