Complete Genome Sequence of a SARS-CoV-2 Strain Sampled in Morocco in May 2020, Obtained Using Sanger Sequencing

被引：2
|
作者：
Rfaki, Abderrazak [1 ,2 ]
Touil, Nadia [2 ,3 ]
Hemlali, Mouhssine [1 ,2 ]
Amine, Sanaa Alaoui [1 ,2 ]
Melloul, Marouane [1 ,2 ]
El Alaoui, Moulay Abdelaziz [1 ,4 ]
Elannaz, Hicham [3 ]
Lahlou, Amine Idriss [3 ]
Elouennass, Mostafa [3 ]
Ennibi, Khalid [3 ]
El Fahime, Elmostafa [1 ,2 ]
机构：
[1] Natl Ctr Sci & Tech Res CNRST, Mol Biol & Funct Genom Platform, Rabat, Morocco
[2] Univ Mohammed 5, Fac Med & Pharm, Genom Ctr Human Pathol GENOPATH, Rabat, Morocco
[3] HMI Med V, Unite Culture Cellulaire, CVMIT, Rabat, Morocco
[4] Univ Ibn Tofail, Fac Sci, Dept Biol, Lab Bot & Protect Plantes,UFR Mycol, Kenitra, Morocco
来源：
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2021年 / 10卷 / 20期
关键词：
D O I：
10.1128/MRA.00387-21
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
The complete genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain was obtained. The strain was isolated from a nasopharyngeal swab specimen from a female patient in Rabat, Morocco, with coronavirus disease 2019 (COVID-19). This strain belongs to clade 20A and has 12 mutations and 8 amino acid substitutions compared to the reference strain Wuhan/Hu-1/2019.
引用
收藏
页数：3
相关论文
共 50 条
  • [31] Genome sequence of SARS-CoV-2 sublineage BA.2.12.1 strain from Bangladesh
    Akram, Arifa
    Al Sium, Syed Muktadir
    Islam, Toufiqul
    Rahman, Md. Ashiqur
    Ali, MD. Mahbub
    Islam, Md. Raihanul
    Bhowmik, Uttom Kumar
    Reza, Md Alimur
    NEW MICROBES AND NEW INFECTIONS, 2022, 49-50
  • [32] A fractal scaling analysis of the SARS-CoV-2 genome sequence
    Meraz, M.
    Vernon-Carter, E. J.
    Rodriguez, E.
    Alvarez-Ramirez, J.
    BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 2022, 73
  • [33] Coding-Complete Sequence of a SARS-CoV-2 Strain from an Omicron (B.1.1.529+BA.1) Variant Detected in Morocco
    Chouati, Taha
    Hemlali, Mouhssine
    Melloul, Marouane
    Alaoui-Amine, Sanaa
    Rhoulam, Safae
    Ghamaz, Hamza
    Ouarab, Maha
    Askander, Omar
    Belayachi, Lamiae
    Touil, Nadia
    El Mchichi, Bouchra
    Elannaz, Hicham
    Laraqui, Abdelillah
    Elouennass, Mostafa
    Ennibi, Khalid
    El Fahime, Elmostafa
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2022, 11 (05):
  • [34] Complete Genome Sequence of a Canadian Klebsiella michiganensis Strain, Obtained Using Oxford Nanopore Technologies Sequencing
    Kang, Mingsong
    Chmara, John
    Duceppe, Marc-Olivier
    Phipps-Todd, Beverley
    Huang, Hongsheng
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2020, 9 (46):
  • [35] Sustained applicability of SARS-CoV-2 variants identification by Sanger Sequencing Strategy on emerging various SARS-CoV-2 Omicron variants in Hiroshima, Japan
    Chhoung, Chanroth
    Ko, Ko
    Ouoba, Serge
    Phyo, Zayar
    Akuffo, Golda Ataa
    Sugiyama, Aya
    Akita, Tomoyuki
    Sasaki, Hiroshi
    Yamamoto, Tadashi
    Takahashi, Kazuaki
    Tanaka, Junko
    BMC GENOMICS, 2024, 25 (01):
  • [36] Alternative genome sequencing approaches of SARS-CoV-2 using Ion AmpliSeq Technology
    Hasan, Md. Shazid
    Rahman, M. Shaminur
    Das, Prosanto Kumar
    Ul Alam, A. S. M. Rubayet
    Islam, Ovinu Kibria
    Al-Emran, Hassan M.
    Hossain, M. Anwar
    Jahid, Iqbal Kabir
    METHODSX, 2024, 12
  • [37] Sequencing SARS-CoV-2 in a Malaria Research Laboratory in Mali, West Africa: The Road to Sequencing the First SARS-CoV-2 Genome in Mali
    Dara, Antoine
    Kouriba, Bourema
    Daou, Amadou
    Sangare, Abdoul Karim
    Kassogue, Djibril
    Dara, Charles
    Djimde, Abdoulaye A.
    PROCESSES, 2021, 9 (12)
  • [38] Validation of a new strategy for the identification of SARS-CoV-2 variants by sequencing the spike gene by Sanger
    Murillo, Enderson
    Palacio-Rua, Katherine
    Afanador-Ayala, Carlos
    Garcia-Correa, Juan Felipe
    Zuluaga, Andres F.
    ENFERMEDADES INFECCIOSAS Y MICROBIOLOGIA CLINICA, 2023, 41 (05): : 284 - 289
  • [39] A tool for the cheap and rapid screening of SARS-CoV-2 variants of concern (VoCs) by Sanger sequencing
    Burgos, German
    Ambuludi, Andres
    Morales-Jadan, Diana
    Garcia-Bereguiain, Miguel Angel
    Muslin, Claire
    Armijos-Jaramillo, Vinicio
    MICROBIOLOGY SPECTRUM, 2023,
  • [40] A tool for the cheap and rapid screening of SARS-CoV-2 variants of concern (VoCs) by Sanger sequencing
    Burgos, German
    Ambuludi, Andres
    Morales-Jadan, Diana
    Garcia-Bereguiain, Miguel Angel
    Muslin, Claire
    Armijos-Jaramillo, Vinicio
    MICROBIOLOGY SPECTRUM, 2023, 11 (05):
12345