Complete mitochondrial genome of Sebastes hubbsi (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea

被引:1
|
作者
Jang, Yo-Soon [1 ,2 ,3 ]
Lee, Eun Kyung [4 ]
Kim, Sung [4 ,5 ]
机构
[1] Korea Inst Ocean Sci & Technol, East Sea Environm Res Div, Uljin Gun, Gyeongbuk, South Korea
[2] Korea Maritime & Ocean Univ, Ocean Sci & Technol Sch, Dept Convergence Study Ocean Sci & Technol, Busan, South Korea
[3] Korea Univ Sci & Technol, Dept Marine Biotechnol, Daejeon, South Korea
[4] Korea Inst Ocean Sci & Technol, Marine Ecosyst Res Div, 787 Haean Ro, Ansan 426744, South Korea
[5] Korea Univ Sci & Technol, Dept Marine Biol, Daejeon, South Korea
关键词
Mitochondrial genome; rockfish; sebastes hubbsi; sebastinae; AUTOMATIC ANNOTATION; VULPES;
D O I
10.3109/19401736.2014.971311
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Hybrids of Sebastes hubbsi, considered a valid species, have been found in the ocean. To examine the basic characteristics of mitochondrial DNA, we analysed the complete mitogenome of S. hubbsis using next-generation sequencing. The complete mitogenome was 16,453 bp in length and comprised 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs and 1 control region. The complete mitochondrial DNA had 27.9% A, 26.7% T, 17.2% G and 28.3% C, showing a slight AT bias (54.5%). The start codon of all PCGs was ATG, except COX1 (GTG). The stop codons in the PCGs were mainly TAA, except ND1 and ND3 (TAG), ND4 (AGA) and Cytb (incomplete termination codon, T). The tRNAs had a typical cloverleaf structure, except tRNA Ser (AGY) which lacked the DHU arm. The complete mitogenome of S. hubbsi can be used for hybridization or on-going speciation studies within allied species in the Scorpaenidae.
引用
收藏
页码:1970 / 1972
页数:3
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