Structural biology in the time of COVID-19: perspectives on methods and milestones

被引:12
|
作者
Lynch, Miranda L. [1 ]
Snell, Edward H. [1 ,2 ]
Bowman, Sarah E. J. [1 ,3 ]
机构
[1] Hauptman Woodward Med Res Inst, 700 Ellicott St, Buffalo, NY 14203 USA
[2] SUNY Buffalo, Dept Mat Design & Innovat, Buffalo, NY 14203 USA
[3] SUNY Buffalo, Jacobs Sch Med & Biomed Sci, Dept Biochem, Buffalo, NY 14023 USA
来源
IUCRJ | 2021年 / 8卷
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
structural biology; SARS-CoV-2; X-ray crystallography; cryoelectron microscopy; COVID-19; SARS-COV-2; PREDICTION; SPIKE;
D O I
10.1107/S2052252521003948
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The global COVID-19 pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has wreaked unprecedented havoc on global society, in terms of a huge loss of life and burden of morbidity, economic upheaval and social disruption. Yet the sheer magnitude and uniqueness of this event has also spawned a massive mobilization of effort in the scientific community to investigate the virus, to develop therapeutics and vaccines, and to understand the public health impacts. Structural biology has been at the center of these efforts, and so it is advantageous to take an opportunity to reflect on the status of structural science vis-a-vis its role in the fight against COVID-19, to register the unprecedented response and to contemplate the role of structural biology in addressing future outbreak threats. As the one-year anniversary of the World Health Organization declaration that COVID-19 is a pandemic has just passed, over 1000 structures of SARS-CoV-2 biomolecules have been deposited in the Worldwide Protein Data Bank (PDB). It is rare to obtain a snapshot of such intense effort in the structural biology arena and is of special interest as the 50th anniversary of the PDB is celebrated in 2021. It is additionally timely as it overlaps with a period that has been termed the 'resolution revolution' in cryoelectron microscopy (CryoEM). CryoEM has recently become capable of producing biomolecular structures at similar resolutions to those traditionally associated with macromolecular X-ray crystallography. Examining SARS-CoV-2 protein structures that have been deposited in the PDB since the virus was first identified allows a unique window into the power of structural biology and a snapshot of the advantages of the different techniques available, as well as insight into the complementarity of the structural methods.
引用
收藏
页码:335 / 341
页数:7
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