Exploring Two Approaches for an End-to-End Scientific Analysis Workflow

被引:0
|
作者
Dodelson, Scott [1 ,2 ,3 ]
Kent, Steve [1 ]
Kowalkowski, Jim [1 ]
Paterno, Marc [1 ]
Sehrish, Saba [1 ]
机构
[1] Fermilab Natl Accelerator Lab, POB 500, Batavia, IL 60510 USA
[2] Univ Chicago, Kavli Inst Cosmol Phys, Chicago, IL 60637 USA
[3] Univ Chicago, Dept Astron & Astrophys, Chicago, IL 60637 USA
基金
美国国家科学基金会;
关键词
D O I
10.1088/1742-6596/664/6/062058
中图分类号
O57 [原子核物理学、高能物理学];
学科分类号
070202 ;
摘要
The scientific discovery process can be advanced by the integration of independently-developed programs run on disparate computing facilities into coherent workflows usable by scientists who are not experts in computing. For such advancement, we need a system which scientists can use to formulate analysis workflows, to integrate new components to these workflows, and to execute different components on resources that are best suited to run those components. In addition, we need to monitor the status of the workflow as components get scheduled and executed, and to access the intermediate and final output for visual exploration and analysis. Finally, it is important for scientists to be able to share their workflows with collaborators. We have explored two approaches for such an analysis framework for the Large Synoptic Survey Telescope (LSST) Dark Energy Science Collaboration (DESC); the first one is based on the use and extension of Galaxy, a web-based portal for biomedical research, and the second one is based on a programming language, Python. In this paper, we present a brief description of the two approaches, describe the kinds of extensions to the Galaxy system we have found necessary in order to support the wide variety of scientific analysis in the cosmology community, and discuss how similar efforts might be of benefit to the HEP community.
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页数:8
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