Single-Cell RNA Sequencing: Unraveling the Brain One Cell at a Time

被引:96
|
作者
Ofengeim, Dimitry [1 ]
Giagtzoglou, Nikolaos [1 ]
Huh, Dann [1 ]
Zou, Chengyu [2 ]
Yuan, Junying [2 ]
机构
[1] Biogen, Neurol, 115 Broadway St, Cambridge, MA 02142 USA
[2] Harvard Med Sch, Dept Cell Biol, 240 Longwood Ave, Boston, MA 02115 USA
关键词
GENE-EXPRESSION; MICROARRAY ANALYSIS; STEM-CELLS; MOUSE; TRANSCRIPTOME; DIVERSITY; REVEALS; SEQ; ADULT; HETEROGENEITY;
D O I
10.1016/j.molmed.2017.04.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Single-cell RNA sequencing (scRNA-seq) is an exciting new technology allowing the analysis of transcriptomes from individual cells, and is ideally suited to address the inherent complexity and dynamics of the central nervous system. scRNA-seq has already been applied to the study of molecular taxonomy of the brain. These works have paved the way to expanding our understanding of the nervous system and provide insights into cellular susceptibilities and molecular mechanisms in neurological and neurodegenerative diseases. We discuss recent progress and challenges in applying this technology to advance our understanding of the brain. We advocate the application of scRNA-seq in the discovery of targets and biomarkers as a new approach in developing novel therapeutics for the treatment of neurodegenerative diseases.
引用
收藏
页码:563 / 576
页数:14
相关论文
共 50 条
  • [21] Unraveling flavivirus pathogenesis: from bulk to single-cell RNA-sequencing strategies
    Kim, Doyeong
    Jeong, Seonghun
    Park, Sang-Min
    KOREAN JOURNAL OF PHYSIOLOGY & PHARMACOLOGY, 2024, 28 (05): : 403 - 411
  • [22] Unraveling the tumor immune microenvironment of lung adenocarcinoma using single-cell RNA sequencing
    Song, Lele
    Gong, Yuan
    Wang, Erpeng
    Huang, Jianchun
    Li, Yuemin
    THERAPEUTIC ADVANCES IN MEDICAL ONCOLOGY, 2024, 16
  • [23] Single-cell isolation by a modular single-cell pipette for RNA-sequencing
    Zhang, Kai
    Gao, Min
    Chong, Zechen
    Li, Ying
    Han, Xin
    Chen, Rui
    Qin, Lidong
    LAB ON A CHIP, 2016, 16 (24) : 4742 - 4748
  • [24] Evaluation of single-cell classifiers for single-cell RNA sequencing data sets
    Zhao, Xinlei
    Wu, Shuang
    Fang, Nan
    Sun, Xiao
    Fan, Jue
    BRIEFINGS IN BIOINFORMATICS, 2020, 21 (05) : 1581 - 1595
  • [25] Deciphering the cellular heterogeneity of the insect brain with single-cell RNA sequencing
    Wang, Xiaofei
    Zhai, Yifan
    Zheng, Hao
    INSECT SCIENCE, 2024, 31 (02) : 314 - 327
  • [26] Single-Cell Sequencing of Brain Cell Transcriptomes and Epigenomes
    Armand, Ethan J.
    Li, Junhao
    Xie, Fangming
    Luo, Chongyuan
    Mukamel, Eran A.
    NEURON, 2021, 109 (01) : 11 - 26
  • [27] Preparation of single cell suspensions enriched in mouse brain vascular cells for single-cell RNA sequencing
    Yamazaki, Akari
    Shue, Francis
    Yamazaki, Yu
    Martens, Yuka A.
    Bu, Guojun
    Liu, Chia-Chen
    STAR PROTOCOLS, 2021, 2 (03):
  • [28] Single-cell RNA sequencing in pancreatic cancer
    Jincheng Han
    Ronald A. DePinho
    Anirban Maitra
    Nature Reviews Gastroenterology & Hepatology, 2021, 18 : 451 - 452
  • [29] Single-cell RNA sequencing in orthopedic research
    Tao Wang
    Ling Wang
    Liping Zhang
    Yubin Long
    Yingze Zhang
    Zhiyong Hou
    Bone Research, 2023, 11 (01) : 89 - 107
  • [30] Single-cell RNA sequencing at isoform resolution
    Evan Z. Macosko
    Nature Biotechnology, 2020, 38 : 697 - 698