Immune disease-associated variants in gene enhancers point to BET epigenetic mechanisms for therapeutic intervention

被引:0
|
作者
Tough, David F. [1 ]
Prinjha, Rab K. [1 ]
机构
[1] GlaxoSmithKline, Immunoinflammat Therapy Area Unit, Med Res Ctr, Epigenet DPU, Stevenage SG1 2NY, Herts, England
关键词
autoimmunity; bromodomain; enhancer; epigenetic gene regulation; GWAS histone; inflammation; super enhancer; NUCLEOSOME CORE PARTICLE; GENOME-WIDE ASSOCIATION; THYMINE DNA GLYCOSYLASE; SUPER-ENHANCERS; T-CELLS; BROMODOMAIN INHIBITOR; SELECTIVE-INHIBITION; REMODELING COMPLEXES; ANGSTROM RESOLUTION; CYTOKINE PRODUCTION;
D O I
暂无
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Genome-wide association studies have identified thousands of single nucleotide polymorphisms in the human genome that are statistically associated with particular disease traits. In this Perspective, we review emerging data suggesting that most single nucleotide polymorphisms associated with immune-mediated diseases are found in regulatory regions of the DNA - parts of the genome that control expression of the protein encoding genes - rather than causing mutations in proteins. We discuss how the emerging understanding of particular gene regulatory regions, gene enhancers and the epigenetic mechanisms by which they are regulated is opening up new opportunities for the treatment of immune-mediated diseases, focusing particularly on the BET family of epigenetic reader proteins as potential therapeutic targets.
引用
收藏
页码:573 / 584
页数:12
相关论文
共 50 条
  • [41] Coronary artery disease-associated immune gene RBP1 and its pan-cancer analysis
    Wang, Yumian
    Zhang, Li
    Chen, Han
    Yang, Juan
    Cui, Yun
    Wang, Hong
    FRONTIERS IN CARDIOVASCULAR MEDICINE, 2023, 10
  • [42] Elucidating disease-associated mechanisms triggered by pollutants via the epigenetic landscape using large-scale ChIP-Seq data
    Zhaonan Zou
    Yuka Yoshimura
    Yoshihiro Yamanishi
    Shinya Oki
    Epigenetics & Chromatin, 16
  • [43] Elucidating disease-associated mechanisms triggered by pollutants via the epigenetic landscape using large-scale ChIP-Seq data
    Zou, Zhaonan
    Yoshimura, Yuka
    Yamanishi, Yoshihiro
    Oki, Shinya
    EPIGENETICS & CHROMATIN, 2023, 16 (01)
  • [44] Disease-associated KIF3A variants alter gene methylation and expression impacting skin barrier and atopic dermatitis risk
    Stevens, Mariana L.
    Zhang, Zhonghua
    Johansson, Elisabet
    Ray, Samriddha
    Jagpal, Amrita
    Ruff, Brandy P.
    Kothari, Arjun
    He, Hua
    Martin, Lisa J.
    Ji, Hong
    Wikenheiser-Brokamp, Kathryn
    Weirauch, Matthew T.
    Supp, Dorothy M.
    Myers, Jocelyn M. Biagini
    Hershey, Gurjit K. Khurana
    NATURE COMMUNICATIONS, 2020, 11 (01)
  • [45] Disease-associated KIF3A variants alter gene methylation and expression impacting skin barrier and atopic dermatitis risk
    Mariana L. Stevens
    Zhonghua Zhang
    Elisabet Johansson
    Samriddha Ray
    Amrita Jagpal
    Brandy P. Ruff
    Arjun Kothari
    Hua He
    Lisa J. Martin
    Hong Ji
    Kathryn Wikenheiser-Brokamp
    Matthew T. Weirauch
    Dorothy M. Supp
    Jocelyn M. Biagini Myers
    Gurjit K. Khurana Hershey
    Nature Communications, 11
  • [46] Crohn's disease-associated epigenetic reader SP140 orchestrates macrophage transcriptional programs through control of DNA unwinding mechanisms
    Amatullah, Hajera
    Mehta, Stuti
    Digumarthi, Sreehas
    Jeffrey, Kate L.
    CYTOKINE, 2017, 100 : 92 - 92
  • [47] A multi-centre clinico-genetic analysis of the VPS35 gene in Parkinson disease indicates reduced penetrance for disease-associated variants
    Sharma, Manu
    Ioannidis, John P. A.
    Aasly, Jan O.
    Annesi, Grazia
    Brice, Alexis
    Bertram, Lars
    Bozi, Maria
    Barcikowska, Maria
    Crosiers, David
    Clarke, Carl E.
    Facheris, Maurizio F.
    Farrer, Matthew
    Garraux, Gaetan
    Gispert, Suzana
    Auburger, Georg
    Vilarino-Guell, Carles
    Hadjigeorgiou, Georgios M.
    Hicks, Andrew A.
    Hattori, Nobutaka
    Jeon, Beom S.
    Jamrozik, Zygmunt
    Krygowska-Wajs, Anna
    Lesage, Suzanne
    Lill, Christina M.
    Lin, Juei-Jueng
    Lynch, Timothy
    Lichtner, Peter
    Lang, Anthony E.
    Libioulle, Cecile
    Murata, Miho
    Mok, Vincent
    Jasinska-Myga, Barbara
    Mellick, George D.
    Morrison, Karen E.
    Meitnger, Thomas
    Zimprich, Alexander
    Opala, Grzegorz
    Pramstaller, Peter P.
    Pichler, Irene
    Park, Sung Sup
    Quattrone, Aldo
    Rogaeva, Ekaterina
    Ross, Owen A.
    Stefanis, Leonidas
    Stockton, Joanne D.
    Satake, Wataru
    Silburn, Peter A.
    Strom, Tim M.
    Theuns, Jessie
    Tan, Eng-King
    JOURNAL OF MEDICAL GENETICS, 2012, 49 (11) : 721 - 726
  • [48] Epigenetic and gene expression analysis of ankylosing spondylitis-associated loci implicate immune cells and the gut in the disease pathogenesis
    Z Li
    K Haynes
    D J Pennisi
    L K Anderson
    X Song
    G P Thomas
    T Kenna
    P Leo
    M A Brown
    Genes & Immunity, 2017, 18 : 135 - 143
  • [49] Epigenetic and gene expression analysis of ankylosing spondylitis-associated loci implicate immune cells and the gut in the disease pathogenesis
    Li, Z.
    Haynes, K.
    Pennisi, D. J.
    Anderson, L. K.
    Song, X.
    Thomas, G. P.
    Kenna, T.
    Leo, P.
    Brown, M. A.
    GENES AND IMMUNITY, 2017, 18 (03) : 135 - 143
  • [50] Cancer Immunotherapy with "Vascular-Immune " Crosstalk as Entry Point: Associated Mechanisms, Therapeutic Drugs and Nano-Delivery Systems
    Jiang, Zhijie
    Fang, Zhujun
    Hong, Dongsheng
    Wang, Xiaojuan
    INTERNATIONAL JOURNAL OF NANOMEDICINE, 2024, 19 : 7383 - 7398