Phylogenetic diversity and the maximum coverage problem

被引:2
|
作者
Moulton, Vincent [1 ]
Spillner, Andreas [2 ]
机构
[1] Univ E Anglia, Sch Comp Sci, Norwich NR4 7TJ, Norfolk, England
[2] Ernst Moritz Arndt Univ Greifswald, Dept Math & Comp Sci, D-17489 Greifswald, Germany
基金
英国工程与自然科学研究理事会;
关键词
Phylogenetic diversity; Greedoid; Hypergraph; Maximum coverage; GREEDY ALGORITHM; LOCATION; SYSTEMS;
D O I
10.1016/j.aml.2009.03.017
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
For a weighted hypergraph (H, omega), with vertex set X, edge set E, and weighting omega : E --> R(>= 0), the maximum coverage problem is to find a k-element subset Y subset of X that maximiz-es the total weight of those edges that have non-empty intersection with Y among all k-element subsets of X. Such a subset Y is called optimal. Recently, within the field of phylogenetics it has been shown that for certain weighted hypergraphs coming from phylogenetic trees the collection of optimal subsets of X forms a so-called strong greedoid. We call hypergraphs having this latter property strongly greedy. In this note we characterize the r-uniform hypergraphs H with unit edge weights that are strongly greedy in the case where r is a prime number. (C) 2009 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1496 / 1499
页数:4
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