Identification of Five Glycolysis-Related Gene Signature and Risk Score Model for Colorectal Cancer

被引:32
|
作者
Zhu, Jun [1 ]
Wang, Shuai [1 ]
Bai, Han [2 ]
Wang, Ke [1 ]
Hao, Jun [3 ]
Zhang, Jian [4 ]
Li, Jipeng [1 ]
机构
[1] Fourth Mil Med Univ, Inst Digest Dis, Xijing Hosp, State Key Lab Canc Biol, Xian, Peoples R China
[2] Fourth Mil Med Univ, Xijing Hosp, Dept Radiat Oncol, Xian, Peoples R China
[3] Fourth Mil Med Univ, Xijing Hosp, Dept Expt Surg, Xian, Peoples R China
[4] Fourth Mil Med Univ, Dept Biochem & Mol Biol, State Key Lab Canc Biol, Xian, Peoples R China
来源
FRONTIERS IN ONCOLOGY | 2021年 / 11卷
基金
中国国家自然科学基金;
关键词
glycolytic gene; prognosis analysis; colorectal cancer; GPC1; ENO3; P4HA1; SPAG4; STC2;
D O I
10.3389/fonc.2021.588811
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Metabolic changes, especially in glucose metabolism, are widely established during the occurrence and development of tumors and regarded as biological markers of pan-cancer. The well-known 'Warburg effect' demonstrates that cancer cells prefer aerobic glycolysis even if there is sufficient ambient oxygen. Accumulating evidence suggests that aerobic glycolysis plays a pivotal role in colorectal cancer (CRC) development. However, few studies have examined the relationship of glycolytic gene clusters with prognosis of CRC patients. Here, our aim is to build a glycolysis-associated gene signature as a biomarker for colorectal cancer. The mRNA sequencing and corresponding clinical data were downloaded from TCGA and GEO databases. Gene set enrichment analysis (GSEA) was performed, indicating that four gene clusters were significantly enriched, which revealed the inextricable relationship of CRC with glycolysis. By comparing gene expression of cancer and adjacent samples, 236 genes were identified. Univariate, multivariate, and LASSO Cox regression analyses screened out five prognostic-related genes (ENO3, GPC1, P4HA1, SPAG4, and STC2). Kaplan-Meier curves and receiver operating characteristic curves (ROC, AUC = 0.766) showed that the risk model could become an effective prognostic indicator (P < 0.001). Multivariate Cox analysis also revealed that this risk model is independent of age and TNM stages. We further validated this risk model in external cohorts (GES38832 and GSE39582), showing these five glycolytic genes could emerge as reliable predictors for CRC patients' outcomes. Lastly, based on five genes and risk score, we construct a nomogram model assessed by C-index (0.7905) and calibration plot. In conclusion, we highlighted the clinical significance of glycolysis in CRC and constructed a glycolysis-related prognostic model, providing a promising target for glycolysis regulation in CRC.
引用
收藏
页数:15
相关论文
共 50 条
  • [41] Identification and Validation of a Novel Glycolysis-Related Gene Signature for Predicting the Prognosis and Therapeutic Response in Triple-Negative Breast Cancer
    Jian Zheng
    Yi-Fan Zhang
    Guo-Hui Han
    Meng-Ying Fan
    Ming-Hui Du
    Guo-Chen Zhang
    Bo Zhang
    Jun Qiao
    Sheng-Xiao Zhang
    Ji-Min Cao
    Advances in Therapy, 2023, 40 : 310 - 330
  • [42] Identification and validation of a glycolysis-related gene signature for depicting clinical characteristics and its relationship with tumor immunity in patients with colon cancer
    Liu, Gang
    Wu, Xiaoyang
    Chen, Jian
    AGING-US, 2022, 14 (21): : 8700 - 8718
  • [43] Nine glycolysis-related gene signature predicting the survival of patients with endometrial adenocarcinoma
    JinHui Liu
    SiYue Li
    Gao Feng
    HuangYang Meng
    SiPei Nie
    Rui Sun
    Jing Yang
    WenJun Cheng
    Cancer Cell International, 20
  • [44] Nine glycolysis-related gene signature predicting the survival of patients with endometrial adenocarcinoma
    Liu, JinHui
    Li, SiYue
    Feng, Gao
    Meng, HuangYang
    Nie, SiPei
    Sun, Rui
    Yang, Jing
    Cheng, WenJun
    CANCER CELL INTERNATIONAL, 2020, 20 (01)
  • [45] A novel disulfidptosis and glycolysis related risk score signature for prediction of prognosis and ICI therapeutic responsiveness in colorectal cancer
    Jiazheng Li
    Chao Yang
    Yongbin Zheng
    Scientific Reports, 13
  • [46] A novel disulfidptosis and glycolysis related risk score signature for prediction of prognosis and ICI therapeutic responsiveness in colorectal cancer
    Li, Jiazheng
    Yang, Chao
    Zheng, Yongbin
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [47] A glycolysis-related signature to improve the current treatment and prognostic evaluation for breast cancer
    Feng, Sijie
    Ning, Linwei
    Zhang, Huizhen
    Wang, Zhenhui
    Lu, Yunkun
    PEERJ COMPUTER SCIENCE, 2024, 12
  • [48] A Glycolysis-Related Five-Gene Signature Predicts Biochemical Recurrence-Free Survival in Patients With Prostate Adenocarcinoma
    Xu, Zijun
    Xu, Lijuan
    Liu, Liping
    Li, Hai
    Jin, Jiewen
    Peng, Miaoguan
    Huang, Yanrui
    Xiao, Haipeng
    Li, Yanbing
    Guan, Hongyu
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [49] A glycolysis-related gene pairs signature predicts prognosis in patients with hepatocellular carcinoma
    Zhou, Weige
    Zhang, Shijing
    Cai, Zheyou
    Gao, Fei
    Deng, Wenhui
    Wen, Yi
    Qiu, Zhen-wen
    Hou, Zheng-kun
    Chen, Xin-Lin
    PEERJ, 2020, 8
  • [50] A glycolysis-related two-gene risk model that can effectively predict the prognosis of patients with rectal cancer
    Zhenzhen Liu
    Zhentao Liu
    Xin Zhou
    Yongqu Lu
    Yanhong Yao
    Wendong Wang
    Siyi Lu
    Bingyan Wang
    Fei Li
    Wei Fu
    Human Genomics, 16