Exome Sequencing Reveals AGBL5 as Novel Candidate Gene and Additional Variants for Retinitis Pigmentosa in Five Turkish Families

被引:31
|
作者
Kastner, Simone [1 ]
Thiemann, Ina-Janine [1 ]
Dekomien, Gabriele [1 ]
Petrasch-Parwez, Elisabeth [2 ]
Schreiber, Sabrina [1 ]
Akkad, Denis A. [1 ]
Gerding, Wanda M. [1 ]
Hoffjan, Sabine [1 ]
Gunes, Sezgin [3 ]
Gunes, Selcuk [4 ]
Bagci, Hasan [3 ]
Epplen, Joerg T. [1 ,5 ]
机构
[1] Ruhr Univ Bochum, Humangenet, D-44780 Bochum, Germany
[2] Ruhr Univ Bochum, Neuroanat & Mol Brain Res, D-44780 Bochum, Germany
[3] Ondokuz Mayis Univ, Fac Med, Dept Med Biol, Samsun, Turkey
[4] Samsun Educ & Res Hosp, Dept Ophthalmol, Samsun, Turkey
[5] Univ Witten Herdecke, Fac Hlth, Witten, Germany
关键词
exome sequencing; AGBL5; CCP5; retinitis pigmentosa; CYTOSOLIC CARBOXYPEPTIDASE; MUTATIONS; CILIA; DATABASE; DISEASE; GENOME; IDENTIFICATION; EXPRESSION; DOMINANT; EYS;
D O I
10.1167/iovs.15-17473
中图分类号
R77 [眼科学];
学科分类号
100212 ;
摘要
PURPOSE. Retinitis pigmentosa (RP) is the most common inherited retinal disease with high genetic heterogeneity and variable phenotypes. Characteristic symptoms include night blindness and progressive loss of visual field, leading to blindness. Mutations in > 60 genes have been identified to date as causative for RP, and additional candidate genes are assumed. METHODS. To find the disease-causing mutations in the affected members of five Turkish families, we sequenced whole exomes using an Illumina platform. RESULTS. Among all candidate genes for retinal degeneration we found two previously known sequence variations: a 4 bp deletion in the RPGR gene (c. 1662_1665delAGAA; p.Glu555-Glyfs*14) and a recently described USH1-causing missense mutation in MYO7A (c. 472G>A, p.Gly158Arg). Furthermore, a novel 1 bp deletion in the VCAN gene (c. 5118delA; p.Ser1707Valfs*44) was detected as well as a large deletion in EYS, spanning similar to 400kb and comprising exons 16-26 (p.fs*). In one family, exome analyses of two affected individuals revealed a homozygous missense mutation (c.883G>A; p.Asp295Asn) in the AGBL5 (Agbl5; CCP5) gene, previously not reported to be associated with RP. RNA and protein analyses showed expression in human retina, as well as in mouse retina, brain and testis. Furthermore, cDNA analyses indicate the existence of tissue-specific AGBL5 splice variations in humans. AGBL5/CCP5 immunoreactivity was also visualized in human and mouse retinae. CONCLUSION. Due to the characteristic RP phenotype in patients carrying the AGBL5 missense mutation we suggest this gene as a candidate for a new form of autosomal recessively inherited RP and recommend further investigation to confirm this hypothesis.
引用
收藏
页码:8045 / 8053
页数:9
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