Mining Sequential Risk Patterns From Large-Scale Clinical Databases for Early Assessment of Chronic Diseases: A Case Study on Chronic Obstructive Pulmonary Disease

被引:29
|
作者
Cheng, Yi-Ting [1 ]
Lin, Yu-Feng [2 ]
Chiang, Kuo-Hwa [3 ,4 ]
Tseng, Vincent S. [5 ]
机构
[1] Natl Cheng Kung Univ, Inst Med Informat, Tainan 701, Taiwan
[2] Natl Cheng Kung Univ, Dept Comp Sci, Tainan 701, Taiwan
[3] Chi Mei Med Ctr, Div Chest Med, Dept Internal Med, Tainan 710, Taiwan
[4] Chia Nan Univ Pharm & Sci, Tainan 710, Taiwan
[5] Natl Chao Tung Univ, Dept Comp Sci, Hsinchu 300, Taiwan
关键词
Data mining; disease risk assessment; early prediction; electronic medical records; sequential patterns; COPD;
D O I
10.1109/JBHI.2017.2657802
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Chronic diseases have been among the major concerns in medical fields since they may cause a heavy burden on healthcare resources and disturb the quality of life. In this paper, we propose a novel framework for early assessment on chronic diseases by mining sequential risk patterns with time interval information from diagnostic clinical records using sequential rules mining, and classification modeling techniques. With a complete workflow, the proposed framework consists of four phases namely data preprocessing, risk pattern mining, classification modeling, and post analysis. For empiricasl evaluation, we demonstrate the effectiveness of our proposed framework with a case study on early assessment of COPD. Through experimental evaluation on a large-scale nationwide clinical database in Taiwan, our approach can not only derive rich sequential risk patterns but also extract novel patterns with valuable insights for further medical investigation such as discovering novel markers and better treatments. To the best of our knowledge, this is the first work addressing the issue of mining sequential risk patterns with time-intervals as well as classification models for early assessment of chronic diseases.
引用
收藏
页码:303 / 311
页数:9
相关论文
共 50 条
  • [31] Clinical impact of anaemia in patients with chronic obstructive pulmonary disease: Results from ECLIPSE study
    Lainscak, Mitja
    Edwards, Lisa
    Anker, Stefan
    Crim, Courtney
    Rennard, Stephen
    Wouters, Emiel
    MacNee, William
    EUROPEAN RESPIRATORY JOURNAL, 2012, 40
  • [32] Chronic obstructive pulmonary disease as a cardiovascular risk factor: results of a case-control study (CONSISTE study)
    Falola, Michael
    INTERNATIONAL JOURNAL OF CHRONIC OBSTRUCTIVE PULMONARY DISEASE, 2013, 8 : 105 - 105
  • [33] Risk factors for osteoporosis in Caucasian patients with moderate chronic obstructive pulmonary disease: A case control study
    Graat-Verboom, Lidwien
    Smeenk, Frank W. J. M.
    van den Borne, Ben E. E. M.
    Spruit, Martijn A.
    Donkers-van Rossum, Astrid B.
    Aarts, Renske P. M.
    Wouters, Emiel F. M.
    BONE, 2012, 50 (06) : 1234 - 1239
  • [34] Large-Scale, Ion-Current-Based Proteomics Investigation of Bronchoalveolar Lavage Fluid in Chronic Obstructive Pulmonary Disease Patients
    Tu, Chengjian
    Mammen, Manoj Jacob
    Li, Jun
    Shen, Xiaomeng
    Jiang, Xiaosheng
    Hu, Qiang
    Wang, Jianmin
    Sethi, Sanjay
    Qu, Jun
    JOURNAL OF PROTEOME RESEARCH, 2014, 13 (02) : 627 - 639
  • [35] The impact of a large-scale natural disaster on patients with chronic obstructive pulmonary disease: The aftermath of the 2011 Great East Japan Earthquake
    Kobayashi, Seiichi
    Hanagama, Masakazu
    Yamanda, Shinsuke
    Satoh, Hikari
    Tokuda, Shinsaku
    Kobayashi, Masakazu
    Ueda, Shinsaku
    Suzuki, Satoshi
    Yanai, Masaru
    RESPIRATORY INVESTIGATION, 2013, 51 (01) : 17 - 23
  • [36] Clinical validation of a risk scale for serious outcomes among patients with chronic obstructive pulmonary disease managed in the emergency department
    Stiell, Ian G.
    Perry, Jeffrey J.
    Clement, Catherine M.
    Brison, Robert J.
    Rowe, Brian H.
    Aaron, Shawn D.
    McRae, Andrew D.
    Borgundvaag, Bjug
    Calder, Lisa A.
    Forster, Alan J.
    Brinkhurst, Jennifer
    Wells, George A.
    CANADIAN MEDICAL ASSOCIATION JOURNAL, 2018, 190 (48) : E1406 - E1413
  • [37] Effects of residential greenness on clinical outcomes of patients with chronic kidney disease: a large-scale observation study
    Park, Jae Yoon
    Jung, Jiyun
    Kim, Yong Chul
    Lee, Hyewon
    Kim, Ejin
    Kim, Yon Su
    Kim, Ho
    Lee, Jung Pyo
    KIDNEY RESEARCH AND CLINICAL PRACTICE, 2021, 40 (02) : 272 - 281
  • [38] eDRAM: Effective early disease risk assessment with matrix factorization on a large-scale medical database: A case study on rheumatoid arthritis
    Chin, Chu-Yu
    Hsieh, Sun-Yuan
    Tseng, Vincent S.
    PLOS ONE, 2018, 13 (11):
  • [39] The role of clinical-functional research in case of pneumoconiosis associated with chronic obstructive pulmonary disease in workers of mining and metallurgical industry
    Rubtsov, R. V.
    MEDICAL PERSPECTIVES-MEDICNI PERSPEKTIVI, 2018, 23 (03): : 176 - 181
  • [40] Assessment of incidence of cerebral vascular diseases and prediction of stroke risk in chronic obstructive pulmonary disease patients using multimodal biomarkers
    Badr, Marwa Y. Y.
    Elkholy, Amira A. A.
    Shoeib, Sara M. M.
    Bahey, Marwa G. G.
    Mohamed, Esraa A. A.
    Reda, Alaa M. M.
    CLINICAL RESPIRATORY JOURNAL, 2023, 17 (03): : 211 - 228