Ab Initio and DFT Study of the Conformational Energy Hypersurface of Cyclic Gly-Gly-Gly

被引:17
|
作者
Tosso, Rodrigo D. [1 ]
Zamora, Miguel A. [1 ,2 ]
Suvire, Fernando D. [1 ,2 ]
Enriz, Ricardo D. [1 ,2 ]
机构
[1] Univ Nacl San Luis, Fac Quim Bioquim & Farm, Dept Quim, RA-5700 San Luis, Argentina
[2] Univ Nacl San Luis, IMIBIO CONICET, RA-5700 San Luis, Argentina
来源
JOURNAL OF PHYSICAL CHEMISTRY A | 2009年 / 113卷 / 40期
关键词
PEPTIDE CONFORMATIONS; CRYSTAL;
D O I
10.1021/jp905187k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The multidimensional conformational potential energy hypersurface (PEHS) of cyclic Gly-Gly-Gly (1,4,7-triazoilane-2,5,8-trione) was comprehensively investigated at the Hartree-Fock (RHF/6-31G(d)) level of theory. The equilibrium structures, their relative stability, and the transition state (TS) structures involved in the conformational interconversion pathways were analyzed. aug-cc-pVTZ//B3LYP/6-311++G** single point calculations predict a trans-cis-cis conformation as the energetically preferred form for this compound. However, all of the levels of theory employed here predicted that two forms, a trans-cis-cis and a cis-cis-cis (crown), of conformers contribute significantly to the equilibrium mixture at room temperature. The conformational interconversion between the global minimum and the symmetric cis-cis-cis crown form requires 12.49 kcal/mol at the RHF 6-31G(d) level of theory, whereas the conformational interconversion between the cis-cis-cis crown and cis-cis-cis boat form requires 18.70 kcal/mol, An exploratory topological analysis of the PEHS was also carried out. Our results allow us to form a concise idea about the internal intricacies of the PEHSs of these cyclic tripeptides, describing the conformations as well as the conformational interconversion processes in these hypersurfaces.
引用
收藏
页码:10818 / 10825
页数:8
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