Modeling, Validation and Verification of Cell-Scaffold Contact Measurements over Terabyte-sized 3D Image Collection

被引：0
|
作者：
Bajcsy, Peter [1 ]
Yoon, Soweon [1 ]
Simon, Mylene [1 ]
Brady, Mary [1 ]
Sriram, Ram [1 ]
Hotaling, Nathan [2 ]
Schaub, Nicholas [2 ]
Simon, Carl G., Jr. [2 ]
Szczypinski, Piotr M. [3 ]
Florczyk, Stephen J. [4 ]
机构：
[1] NIST, Informat Technol Lab, Gaithersburg, MD 20899 USA
[2] NIST, Mat Measurement Lab, Gaithersburg, MD 20899 USA
[3] Lodz Univ Technol, Insititute Elect, Lodz, Poland
[4] Univ Cent Florida, Dept Mat Sci & Engn, Orlando, FL 32816 USA
来源：
2016 IEEE INTERNATIONAL CONFERENCE ON BIG DATA (BIG DATA) | 2016年
关键词：
Big Data; 3D; Image Processing;
D O I：
暂无
中图分类号：
TP [自动化技术、计算机技术];
学科分类号：
0812 ;
摘要：
This poster presents the problem of 3D contact measurements from two co-registered volumetric images (z-stacks). The 3D contact measurement consists of (a) segmenting an object of interest in each z-stack, (b) computing the relative spatial positions of the detected objects to detect contacts, (c) validating the accuracy of segmentation, and (d) visually verifying correct contact detection. The 3D measurement has to overcome challenges related to (1) intensity bleed-through across co-registered volumes, (2) insufficient knowledge about statistics and geometry of objects, (3) large RAM requirements (similar to 3GB just to load the input data) and data volume (>1TB), and (4) complexity of 3D visual inspection.
引用
收藏
页码：3951 / 3953
页数：3
相关论文
共 35 条
  • [21] Cell-free 3D scaffold with two-stage delivery of miRNA-26a to regenerate critical-sized bone defects
    Zhang, Xiaojin
    Li, Yan
    Chen, Y. Eugene
    Chen, Jihua
    Ma, Peter X.
    NATURE COMMUNICATIONS, 2016, 7
  • [22] Cell-free 3D scaffold with two-stage delivery of miRNA-26a to regenerate critical-sized bone defects
    Xiaojin Zhang
    Yan Li
    Y. Eugene Chen
    Jihua Chen
    Peter X. Ma
    Nature Communications, 7
  • [23] 3D geometric modeling analysis of contact probability effect in carbon black oxidation over MnOx-CeO2 catalysts
    Gao, Jingheng
    Xiong, Yifei
    Zhang, Qian
    Jiang, Yiwen
    Wang, Jing
    Zou, Sibei
    Fu, Mingli
    Wu, Junliang
    Hu, Yun
    Ye, Daiqi
    CHEMICAL ENGINEERING JOURNAL, 2020, 398
  • [24] SYNTHETIC APERTURE RADAR IMAGE ANALYSIS AS A TOOL FOR VALIDATION OF BAROCLINIC INTERNAL WAVE 3D MODELING IN ALGECIRAS BAY (STRAIT OF GIBRALTAR)
    Gonzalez, C. J.
    Lopez, L.
    Gomez-Enri, J.
    Gomiz, J. J.
    Alvarez, O.
    Bruno, M.
    Mananes, R.
    Villares, P.
    2010 IEEE INTERNATIONAL GEOSCIENCE AND REMOTE SENSING SYMPOSIUM, 2010, : 952 - 954
  • [25] Image-based 3D modeling and validation of radiofrequency interstitial tumor ablation using a tissue-mimicking breast phantom
    Zhigang Wang
    Isshaa Aarya
    Mariana Gueorguieva
    Dun Liu
    Hongyan Luo
    Luigi Manfredi
    Lijun Wang
    Donald McLean
    Stuart Coleman
    Stuart Brown
    Alfred Cuschieri
    International Journal of Computer Assisted Radiology and Surgery, 2012, 7 : 941 - 948
  • [26] Image-based 3D modeling and validation of radiofrequency interstitial tumor ablation using a tissue-mimicking breast phantom
    Wang, Zhigang
    Aarya, Isshaa
    Gueorguieva, Mariana
    Liu, Dun
    Luo, Hongyan
    Manfredi, Luigi
    Wang, Lijun
    McLean, Donald
    Coleman, Stuart
    Brown, Stuart
    Cuschieri, Alfred
    INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 2012, 7 (06) : 941 - 948
  • [27] Role of bone 1stem cell–seeded 3D polylactic acid/polycaprolactone/hydroxyapatite scaffold on a critical-sized radial bone defect in rat
    Sonia Sahvieh
    Ahmad Oryan
    Shadi Hassanajili
    Amir Kamali
    Cell and Tissue Research, 2021, 383 : 735 - 750
  • [28] Advanced FTIR Optical Modeling for Hydrogen Content Measurements in 3D NAND Cell Nitride and Amorphous Carbon Hard Mask
    Frederick, Joshua
    Wang, Youcheng
    Qiu, Haodong
    Song, Eui Sang
    Takabayashi, Sadao
    Williamson, Izaak
    Lucas, Ryan
    Chen, Zhuo
    Wang, Peter
    Ravot, Benoit
    Wang, Hao
    Engelhard, Dan
    METROLOGY, INSPECTION, AND PROCESS CONTROL XXXVIII, 2024, 12955
  • [29] An image-based reconstruction of the 3D geometry of an Al open-cell foam and FEM modeling of the material response
    Michailidis, N.
    Stergioudi, F.
    Omar, H.
    Tsipas, D. N.
    MECHANICS OF MATERIALS, 2010, 42 (02) : 142 - 147
  • [30] Role of bone 1stem cell-seeded 3D polylactic acid/polycaprolactone/hydroxyapatite scaffold on a critical-sized radial bone defect in rat
    Sahvieh, Sonia
    Oryan, Ahmad
    Hassanajili, Shadi
    Kamali, Amir
    CELL AND TISSUE RESEARCH, 2021, 383 (02) : 735 - 750
1234