The hematopoietic regulator TAL1 is required for chromatin looping between the β-globin LCR and human γ-globin genes to activate transcription

被引:48
|
作者
Yun, Won Ju [1 ]
Kim, Yea Woon [1 ]
Kang, Yujin [1 ]
Lee, Jungbae [1 ]
Dean, Ann [2 ]
Kim, AeRi [1 ]
机构
[1] Pusan Natl Univ, Coll Nat Sci, Dept Mol Biol, Pusan 609735, South Korea
[2] NIDDK, Lab Cellular & Dev Biol, NIH, Bethesda, MD 20892 USA
基金
美国国家卫生研究院; 新加坡国家研究基金会;
关键词
LOCUS-CONTROL REGION; ERYTHROID-DIFFERENTIATION; FACTOR GATA-1; QUANTITATIVE-ANALYSIS; CELLS; COMPLEXES; SCL; EXPRESSION; BINDING; NF-E2;
D O I
10.1093/nar/gku072
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
TAL1 is a key hematopoietic transcription factor that binds to regulatory regions of a large cohort of erythroid genes as part of a complex with GATA-1, LMO2 and Ldb1. The complex mediates long-range interaction between the beta-globin locus control region (LCR) and active globin genes, and although TAL1 is one of the two DNA-binding complex members, its role is unclear. To explore the role of TAL1 in transcription activation of the human gamma-globin genes, we reduced the expression of TAL1 in erythroid K562 cells using lentiviral short hairpin RNA, compromising its association in the beta-globin locus. In the TAL1 knockdown cells, the gamma-globin transcription was reduced to 35% and chromatin looping of the (G)gamma-globin gene with the LCR was disrupted with decreased occupancy of the complex member Ldb1 and LMO2 in the locus. However, GATA-1 binding, DNase I hypersensitive site formation and several histone modifications were largely maintained across the beta-globin locus. In addition, overexpression of TAL1 increased the gamma-globin transcription and increased interaction frequency between the (G)gamma-globin gene and LCR. These results indicate that TAL1 plays a critical role in chromatin loop formation between the gamma-globin genes and LCR, which is a critical step for the transcription of the gamma-globin genes.
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页码:4283 / 4293
页数:11
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