Retardation of Protein Dynamics by Trehalose in Dehydrated Systems of Photosynthetic Reaction Centers. Insights from Electron Transfer and Thermal Denaturation Kinetics

被引:26
|
作者
Malferrari, Marco [1 ]
Francia, Francesco [1 ]
Venturoli, Giovanni [1 ,2 ]
机构
[1] Univ Bologna, Dipartimento Farm & Biotecnol, Lab Biochim & Biofis Mol, I-40126 Bologna, Italy
[2] Univ Bologna, Dipartimento Fis, Consorzio Nazl Interuniv Sci Fis Mat CNISM, I-40127 Bologna, Italy
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2015年 / 119卷 / 43期
关键词
BACTERIAL REACTION CENTERS; INDUCED CONFORMATIONAL TRANSITIONS; LYOPHILIZED BOVINE SOMATOTROPIN; INDUCED STRUCTURAL-CHANGES; DIFFERENT HYDRATION LEVELS; HIGH-FIELD EPR; MOLECULAR-DYNAMICS; RHODOBACTER-SPHAEROIDES; NEUTRON-SCATTERING; CHARGE RECOMBINATION;
D O I
10.1021/acs.jpcb.5b02986
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Conformational protein dynamics is known to be hampered in amorphous matrixes upon dehydration, both in the absence and in the presence of glass forming disaccharides, like trehalose, resulting in enhanced protein thermal stability. To shed light on such matrix effects, we have compared the retardation of protein dynamics in photo-synthetic bacterial reaction centers (RC) dehydrated at controlled relative humidity in the absence (RC films) or in the presence of trehalose (RC-trehalose glasses). Small scale RC dynamics, associated with the relaxation from the dark-adapted to the light-adapted conformation, have been probed up to the second time scale by analyzing the kinetics of electron transfer from the photoreduced quinone acceptor (Q(A)(-)) to the photoxidized primary donor (P+) as a function of the duration of photoexcitation from 7 ns (laser pulse) to 20 s. A more severe inhibition of dynamics is found in RC trehalose glasses than in RC films: only in the latter system does a complete relaxation to the light-adapted conformation occur even at extreme dehydration, although strongly retarded. To gain insight into the large scale RC dynamics up to the time scale of days, the kinetics of thermal denaturation have been studied at 44 degrees C by spectral analysis of the Q(x) and Q(y) bands of the RC bacteriochlorin cofactors, as a function of the sugar/protein molar ratio, m, varied between 0 and 10(4). Upon increasing m, denaturation is slowed progressively, and above m similar to 500 the RC is stable at least for several days. The stronger retardation of RC relaxation and dynamics induced by trehalose is discussed in the light of a recent molecular dynamics simulation study performed in matrixes of the model protein lysozyme with and without trehalose. We suggest that the efficiency of trehalose in retarding RC dynamics and preventing thermal denaturation stems mainly from its propensity to form and stabilize extended networks of hydrogen bonds involving sugar, residual water, and surface residues of the RC complex and from its ability of reducing the free volume fraction of protein alone matrixes.
引用
收藏
页码:13600 / 13618
页数:19
相关论文
共 50 条
  • [31] Primary electron transfer processes in photosynthetic reaction centers from oxygenic organisms
    Mamedov, Mahir
    Govindjee
    Nadtochenko, Victor
    Semenov, Alexey
    PHOTOSYNTHESIS RESEARCH, 2015, 125 (1-2) : 51 - 63
  • [32] Primary electron transfer processes in photosynthetic reaction centers from oxygenic organisms
    Mahir Mamedov
    Victor Govindjee
    Alexey Nadtochenko
    Photosynthesis Research, 2015, 125 : 51 - 63
  • [33] Kinetics of electron transfer in isolated reaction centers depends on protein concentration.
    Shinkarev, VP
    Wraight, CA
    BIOPHYSICAL JOURNAL, 1996, 70 (02) : TU550 - TU550
  • [34] INTRAMOLECULAR DYNAMICS AND ELECTRON-TRANSFER IN PHOTOSYNTHETIC REACTION CENTERS - STUDY BY THE METHOD OF SPIN LABELS
    KOCHETKOV, VV
    LIKHTENSTEIN, GI
    KOLTOVER, VK
    KNOX, PP
    KONONENKO, AA
    GRISHANOVA, PG
    RUBIN, AB
    IZVESTIYA AKADEMII NAUK SSSR SERIYA BIOLOGICHESKAYA, 1984, (04): : 572 - 578
  • [35] Theoretical study of the mechanism of electron transfer at photosynthetic reaction centers. I. Singlet excited states of free base porphin
    Kitao, O
    Ushiyama, H
    Miura, N
    JOURNAL OF CHEMICAL PHYSICS, 1999, 110 (06): : 2936 - 2946
  • [36] ELECTRIC-FIELD EFFECTS ON THE INITIAL ELECTRON-TRANSFER KINETICS IN BACTERIAL PHOTOSYNTHETIC REACTION CENTERS
    LOCKHART, DJ
    KIRMAIER, C
    HOLTEN, D
    BOXER, SG
    JOURNAL OF PHYSICAL CHEMISTRY, 1990, 94 (18): : 6987 - 6995
  • [37] Superexchange Electron Transfer and Protein Matrix in the Charge-Separation Process of Photosynthetic Reaction Centers
    Saito, Keisuke
    Tamura, Hiroyuki
    Ishikita, Hiroshi
    JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2024, 15 (36): : 9183 - 9192
  • [38] Analysis of kinetics of electron transfer in the reaction centers of photosynthetic bacteria using the Rips-Jortner model
    Kotel'nikov A.I.
    Goryachev N.S.
    Rubtsov A.Yu.
    Psikha B.L.
    Ortega J.M.
    Doklady Biochemistry and Biophysics, 2005, 405 (1-6) : 461 - 464
  • [39] Picosecond Electron Transfer from Photosynthetic Reaction Center Protein to GaAs
    Sepunaru, Lior
    Tsimberov, Irena
    Forolov, Ludmila
    Carmeli, Chanoch
    Carmeli, Itai
    Rosenwaks, Yossi
    NANO LETTERS, 2009, 9 (07) : 2751 - 2755
  • [40] ELECTRON-TRANSFER IN PHOTOSYNTHETIC REACTION CENTERS AND RIGIDLY LINKED DONOR-ACCEPTOR SYSTEMS
    MICHELBEYERLE, ME
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1990, 200 : 195 - PHYS