The authors describe a method for the colorimetric determination of unamplified microRNA. It is based on the use of citrate-capped gold nanoparticles (AuNPs) and, alternatively, a microRNA-probe hybrid or a magnetically extracted microRNA that serve as stabilizers against the salt-induced aggregation of AuNPs. The absorbance ratios A(525)/A(625) of the reacted AuNP solutions were used to quantify the amount of microRNA. The assay works in the range of 5-25 pmol microRNA. The lower limit of detection (LOD) is 10 pmol. The performance of the method was tested by detection of microRNA-210-3p in totally extracted urinary microRNA from normal, benign, and bladder cancer subjects. The sensitivity and specificity for qualitative detection of urinary microRNA-210-3p using the assay are 74% and 88% respectively, which is consistent with real time PCR based assays. The assay was applied to the determination of specific microRNA by using its specific oligo targeter or following magnetic isolation of the desired microRNA. The method is simple, cost-efficient, has a short turn-around time and requires minimal equipment and personnel.
机构:
CSIR, Natl Chem Lab, Chem Eng & Proc Dev Div, Pune 411008, IndiaCSIR, Natl Chem Lab, Chem Eng & Proc Dev Div, Pune 411008, India
Bari, Atul H.
Shukla, Neerja
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CSIR, Natl Chem Lab, Chem Eng & Proc Dev Div, Pune 411008, IndiaCSIR, Natl Chem Lab, Chem Eng & Proc Dev Div, Pune 411008, India
Shukla, Neerja
Gavriilidis, Asterios
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UCL, Dept Chem Engn, Torrington Pl, London WC1E 7JE, EnglandCSIR, Natl Chem Lab, Chem Eng & Proc Dev Div, Pune 411008, India
Gavriilidis, Asterios
Kulkarni, Amol A.
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CSIR, Natl Chem Lab, Chem Eng & Proc Dev Div, Pune 411008, India
Acad Sci & Innovat Res AcSIR, Ghaziabad 201002, IndiaCSIR, Natl Chem Lab, Chem Eng & Proc Dev Div, Pune 411008, India
机构:
Vilnius Gediminas Tech Univ, Fac Fundamental Sci, Sauletekio Al 11, LT-10223 Vilnius, Lithuania
Vilnius Univ, Life Sci Ctr, Inst Biochem, Sauletekio Al 7, LT-10257 Vilnius, LithuaniaVilnius Gediminas Tech Univ, Fac Fundamental Sci, Sauletekio Al 11, LT-10223 Vilnius, Lithuania
Ramonas, Eimantas
Shafaat, Atefeh
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Malmo Univ, Fac Hlth & Soc, Dept Biomed Sci, SE-20506 Malmo, Sweden
Malmo Univ, Biofilms Res Ctr Biointerfaces, SE-20506 Malmo, SwedenVilnius Gediminas Tech Univ, Fac Fundamental Sci, Sauletekio Al 11, LT-10223 Vilnius, Lithuania
Shafaat, Atefeh
Dagys, Marius
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机构:
Vilnius Univ, Life Sci Ctr, Inst Biochem, Sauletekio Al 7, LT-10257 Vilnius, LithuaniaVilnius Gediminas Tech Univ, Fac Fundamental Sci, Sauletekio Al 11, LT-10223 Vilnius, Lithuania
Dagys, Marius
Ruzgas, Tautgirdas
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Malmo Univ, Fac Hlth & Soc, Dept Biomed Sci, SE-20506 Malmo, Sweden
Malmo Univ, Biofilms Res Ctr Biointerfaces, SE-20506 Malmo, SwedenVilnius Gediminas Tech Univ, Fac Fundamental Sci, Sauletekio Al 11, LT-10223 Vilnius, Lithuania
Ruzgas, Tautgirdas
Ratautas, Dalius
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机构:
Vilnius Gediminas Tech Univ, Fac Fundamental Sci, Sauletekio Al 11, LT-10223 Vilnius, Lithuania
Vilnius Univ, Life Sci Ctr, Inst Biochem, Sauletekio Al 7, LT-10257 Vilnius, LithuaniaVilnius Gediminas Tech Univ, Fac Fundamental Sci, Sauletekio Al 11, LT-10223 Vilnius, Lithuania
机构:
Univ Udine, DSMB, I-33100 Udine, Italy
Ist Nazl Biostrutture & Biosistemi, I-00136 Rome, Italy
New York Univ Abu Dhabi, Sci & Math Div, Abu Dhabi, U Arab EmiratesCNR, Ctr S3, Inst Nanosci, I-41125 Modena, Italy