A computational approach to multistationarity of power-law kinetic systems

被引:14
|
作者
Hernandez, Bryan S. [1 ]
Mendoza, Eduardo R. [2 ,3 ,4 ,5 ]
de los Reyes, Aurelio A., V [1 ]
机构
[1] Univ Philippines Diliman, Inst Math, Quezon City 1101, Philippines
[2] Univ Philippines Los Banos, Inst Math Sci & Phys, Laguna, Philippines
[3] De La Salle Univ, Math & Stat Dept, Manila 0922, Philippines
[4] Max Planck Inst Biochem, Martinsried, Germany
[5] LMU Fac Phys, Geschwister Scholl Pl 1, D-80539 Munich, Germany
关键词
Chemical reaction network theory; Power-law kinetics; Higher deficiency algorithm; Multistationarity; Anaerobic yeast fermentation pathway; Global carbon cycle model; FERMENTATION PATHWAY; REACTION NETWORKS; STEADY-STATES; EQUILIBRIA;
D O I
10.1007/s10910-019-01072-7
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
This paper presents a computational solution to determine if a chemical reaction network endowed with power-law kinetics (PLK system) has the capacity for multistationarity, i.e., whether there exist positive rate constants such that the corresponding differential equations admit multiple positive steady states within a stoichiometric class. The approach, which is called the "Multistationarity Algorithm for PLK systems" (MSA), combines (i) the extension of the "higher deficiency algorithm" of Ji and Feinberg for mass action to PLK systems with reactant-determined interactions, and (ii) a method that transforms any PLK system to a dynamically equivalent one with reactant-determined interactions. Using this algorithm, we obtain two new results: the monostationarity of a popular model of anaerobic yeast fermentation pathway, and the multistationarity of a global carbon cycle model with climate engineering, both in the generalized mass action format of biochemical systems theory. We also provide examples of the broader scope of our approach for deficiency one PLK systems in comparison to the extension of Feinberg's "deficiency one algorithm" to such systems.
引用
收藏
页码:56 / 87
页数:32
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