An integrated software system for analyzing nanopore data

被引：10
|
作者：
Zhang, Na [1 ,2 ]
Hu, Yong-Xu [2 ]
Gu, Zhen [1 ,2 ]
Ying, Yi-Lun [2 ]
He, Pin-Gang [1 ]
Long, Yi-Tao [2 ]
机构：
[1] E China Normal Univ, Dept Chem, Shanghai 200241, Peoples R China
[2] E China Univ Sci & Technol, Dept Chem, Key Lab Adv Mat, Shanghai 200237, Peoples R China
来源：
CHINESE SCIENCE BULLETIN | 2014年 / 59卷 / 35期
基金：
中国国家自然科学基金;
关键词：
Nanopore; Data analysis; Integrated software system; beta-Amyloid; 42; SINGLE-MOLECULE; PROTEIN NANOPORE; MEMBRANE-CHANNEL; TRANSLOCATION; DNA; EVENTS;
D O I：
10.1007/s11434-014-0660-4
中图分类号：
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
We presented an integrated software system for analyzing nanopore data. This self-developed software provided rapid processes for accurate location, classification, and evaluation of every individual blockade. Using the proposed software, statistical analysis could be achieved easily and conveniently. The results of beta-Amyloid 42 demonstrated that our data process could rapidly extract duration time and current amplitudes. In addition, our data process could accurately carry out statistical fittings.
引用
收藏
页码：4942 / 4945
页数：4
相关论文
共 50 条
  • [21] AN INTEGRATED SOFTWARE SYSTEM FOR MICROCOMPUTER MANAGEMENT OF RECOMBINANT-DNA DATA
    CAMPIONEPICCARDO, J
    RUBEN, M
    NUCLEIC ACIDS RESEARCH, 1986, 14 (01) : 571 - 574
  • [22] Analyzing software science data with partial repeatability
    Cai, KY
    Chen, L
    JOURNAL OF SYSTEMS AND SOFTWARE, 2002, 63 (03) : 173 - 186
  • [23] INTELLIGENT ANALYSIS OF DATA USING INTEGRATED SOFTWARE SYSTEM - STATISTICAL ANALYSIS SYSTEM (SAS)
    Stelian, Stancu
    Constantin, Alexandra Maria
    INTERNATIONAL CONFERENCE ON INFORMATICS IN ECONOMY, 2012, : 246 - +
  • [24] Collecting, integrating and analyzing software metrics and personal software process data
    Sillitti, A
    Janes, A
    Succi, G
    Vernazza, T
    PROCEEDINGS OF THE 29TH EUROMICRO CONFERENCE: NEW WAVES IN SYSTEM ARCHITECTURE, 2003, : 336 - 342
  • [25] cVIS - A Software System for Analyzing Visual Perception
    Raschke, M.
    Ertl, T.
    PERCEPTION, 2013, 42 : 221 - 221
  • [26] DESCRIBING AND ANALYZING DISTRIBUTED SOFTWARE SYSTEM DESIGNS
    AVRUNIN, GS
    WILEDEN, JC
    ACM TRANSACTIONS ON PROGRAMMING LANGUAGES AND SYSTEMS, 1985, 7 (03): : 380 - 403
  • [27] IMAGE ANALYZING SOFTWARE SYSTEM FOR CYTOLOGY.
    Bartels, Peter H.
    Wied, George L.
    1977, : 282 - 284
  • [28] TongueTwister: An integrated program for analyzing lickometer data
    Houpt, TA
    Frankmann, SP
    PHYSIOLOGY & BEHAVIOR, 1996, 60 (05) : 1277 - 1283
  • [29] LSPR spectrometer integrated software system: advanced data processing algorithms for biosensing
    Zhou, Mixing
    Geng, Zhaoxin
    PROCEEDINGS OF 2024 4TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND INTELLIGENT COMPUTING, BIC 2024, 2024, : 337 - 343
  • [30] Strategies for analyzing qualitative data with qualitative analysis software
    Talanquer, Vicente A.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2014, 247
12345