Assessment of genetic diversity, population structure and morphological analyses in an Iranian endemic species Rhabdosciadium aucheri Boiss. (Apiaceae) using ISSR markers

被引:6
|
作者
Kazemeini, Fatemeh [1 ]
Asri, Younes [2 ]
Mostafavi, Golaleh [3 ]
Kalvandi, Ramezan [4 ]
Mehregan, Iraj [1 ]
机构
[1] Islamic Azad Univ, Dept Biol, Sci & Res Branch, Tehran, Iran
[2] Agr Res Educ & Extens Org AREEO, Dept Bot, Res Inst Forests & Rangelands, Tehran, Iran
[3] Islamic Azad Univ, Dept Biol, Yadegar E Imam Khomeini RAH Shahre Rey Branch, Tehran, Iran
[4] Agr Res Educ & Extens Org AREEO, Nat Resources Res Div, Hamadan Agr & Nat Resources Res & Educ Ctr, Hamadan, Hamadan, Iran
关键词
Conservation strategies; Genetic diversity and differentiation; ISSR markers; Rhabdosciadium aucheri; SEQUENCE REPEAT ISSR; MOLECULAR PHYLOGENY; GENOTYPE; DISTANCE; PLANTS; RARE; FLOW; DIFFERENTIATION; METAPOPULATION; INFERENCE;
D O I
10.2478/s11756-020-00637-1
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Rhabdosciadium aucheri (Apiaceae) is an Iranian endemic species, which grows in west, center and south regions of Iran. The aim of the present study was to investigate the genetic diversity, population structure and morphological variations of 70 individuals belonging to seven geographical populations of Hamadan, Lorestan, Kurdistan and Chaharmahal and Bakhtiari provinces, employing inter-simple sequence repeat (ISSR) markers. In order to estimate morphological variations 38 characters were used. For molecular investigations, three gene pools in the country were identified using STRUCTURE analysis and K-Means clustering and also separation by the distance among the mentioned populations was defined properly. The Mantel test showed correlation between genetic and geographical distance. Analysis of molecular variance (AMOVA) demonstrated a significant genetic variability among the studied populations. It showed that 52% of total genetic variation was due to within-population diversity. These data might be used in conservation of this considerable medicinal species in the country.
引用
收藏
页码:441 / 451
页数:11
相关论文
共 50 条
  • [41] Analysis of Genetic Diversity and Population Structure in Horsegram (Macrotyloma uniflorum) Using RAPD and ISSR Markers
    Sharma V.
    Sharma T.R.
    Rana J.C.
    Chahota R.K.
    Agricultural Research, 2015, 4 (03) : 221 - 230
  • [42] Assessment of the genetic diversity and relationships of a collection of Mentha spp. in Tunisia using morphological traits and ISSR markers
    Soilhi, Z.
    Trindade, H.
    Vicente, S.
    Gouiaa, S.
    Khoudi, H.
    Mekki, M.
    JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY, 2020, 95 (04): : 483 - 495
  • [43] Genetic Diversity and Population Structure Analysis in the Chinese Endemic Species Michelia crassipes Based on SSR Markers
    Xiao, Yuguang
    Jiang, Xiaolong
    Lu, Chengcheng
    Liu, Jun
    Diao, Shu
    Jiang, Jingmin
    FORESTS, 2023, 14 (03):
  • [44] Analysis of genetic diversity and population structure in Asparagus species using SSR markers
    Kapoor, Manish
    Mawal, Pooja
    Sharma, Vikas
    Gupta, Raghbir Chand
    JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY, 2020, 18 (01)
  • [45] Analysis of genetic diversity and population structure in Asparagus species using SSR markers
    Manish Kapoor
    Pooja Mawal
    Vikas Sharma
    Raghbir Chand Gupta
    Journal of Genetic Engineering and Biotechnology, 18
  • [46] Genetic diversity and population structure of Irvingia species using DArTseq generated markers
    Jepkemboi, Sylvia
    Ojola, Patroba
    FORESTS TREES AND LIVELIHOODS, 2023, 32 (01) : 42 - 54
  • [47] Assessment of the genetic diversity and population structure of rice genotypes using SSR markers
    Suvi, William Titus
    Shimelis, Hussein
    Laing, Mark
    Mathew, Isack
    Shayanowako, Admire Isaac Tichafa
    ACTA AGRICULTURAE SCANDINAVICA SECTION B-SOIL AND PLANT SCIENCE, 2020, 70 (01): : 76 - 86
  • [48] Genetic diversity of wild populations of Tuberaria major (Cistaceae), an endangered species endemic to the Algarve region (Portugal), using ISSR markers
    Trindade, Helena
    Sena, Ines
    Goncalves, Sandra
    Romano, Anabela
    BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 2012, 45 : 49 - 56
  • [49] Assessment of allelic and genetic diversity, and population structure among farmers' rice varieties using microsatellite markers and morphological traits
    Roy, Pritesh Sundar
    Nayak, Shubhransu
    Samanta, Soma
    Chhotaray, Apurba
    Mohanty, Soumya
    Dhua, Sudhiranjan
    Dhua, Urmila
    Patra, Bhaskar Chandra
    Tiwari, Kapil Kumar
    Mithra, S. V. Amitha C. R.
    Sah, Rameswar Prasad
    Behera, Lambodar
    Mohapatra, Trilochan
    GENE REPORTS, 2023, 30
  • [50] Molecular characterization and genetic diversity assessment of ten plant species under family Combretaceae using ISSR markers
    Arundhati, Das
    Akshayakumar, Bastia
    Ranjan, Rout Gyana
    RESEARCH JOURNAL OF BIOTECHNOLOGY, 2020, 15 (12): : 11 - 18