Non-contiguous finished genome sequence and description of Alistipes ihumii sp nov.

被引:9
|
作者
Pfleiderer, Anne [1 ]
Mishra, Ajay Kumar [1 ]
Lagier, Jean-Christophe [1 ]
Robert, Catherine [1 ]
Caputo, Aurelia [1 ]
Raoult, Didier [1 ,2 ]
Fournier, Pierre-Edouard [1 ]
机构
[1] Aix Marseille Univ, URMITE, Fac Med, UM63, Marseille, France
[2] King Abdulaziz Univ, King Fahd Med Res Ctr, Jeddah 21413, Saudi Arabia
来源
STANDARDS IN GENOMIC SCIENCES | 2014年 / 9卷 / 03期
关键词
Alistipes ihumii; genome; culturomics; taxono-genomics; GEN; NOV; BACTEROIDES-PUTREDINIS; MEMBER; CULTUROMICS; BACTERIA;
D O I
10.4056/sigs.4698398
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Alistipes ihumii strain AP11(T) sp. nov. is the type strain of A. ihumii sp. nov., a new species within the genus Alistipes. This strain, whose genome is described here, was isolated from the fecal flora of a 21-year-old French Caucasian female, suffering from a severe restrictive form of anorexia nervosa since the age of 12 years. A. ihumii is a Gram-negative anaerobic bacillus. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,753,264 bp long genome (one chromosome but no plasmid) contains 2,254 protein-coding and 47 RNA genes, including 3 rRNA genes.
引用
收藏
页码:1221 / 1235
页数:17
相关论文
共 50 条
  • [21] Non-contiguous finished genome sequence and description of Halopiger djelfamassiliensis sp nov.
    Hassani, Ikram Imene
    Robert, Catherine
    Michelle, Caroline
    Raoult, Didier
    Hacene, Hocine
    Desnues, Christelle
    STANDARDS IN GENOMIC SCIENCES, 2013, 9 (01): : 160 - 174
  • [22] Non-contiguous finished genome sequence and description of Brevibacterium senegalense sp nov.
    Kokcha, Sahare
    Ramasamy, Dhamodharan
    Lagier, Jean-Christophe
    Robert, Catherine
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2012, 7 (02): : 233 - 245
  • [23] Non-contiguous finished genome sequence and description of Kurthia massiliensis sp nov.
    Roux, Veronique
    El Karkouri, Khalid
    Lagier, Jean-Christophe
    Robert, Catherine
    Raoult, Didier
    STANDARDS IN GENOMIC SCIENCES, 2012, 7 (02): : 221 - 232
  • [24] Non-contiguous finished genome sequence and description of Collinsella massiliensis sp nov.
    Padmanabhan, Roshan
    Dubourg, Gregory
    Lagier, Jean-Christophe
    Thi-Thien Nguyen
    Couderc, Carine
    Rossi-Tamisier, Morgane
    Caputo, Aurelia
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2014, 9 (03):
  • [25] Non-contiguous finished genome sequence and description of Halopiger goleamassiliensis sp nov.
    Ikram, Hassani Imene
    Catherine, Robert
    Caroline, Michelle
    Didier, Raoult
    Hocine, Hacene
    Christelle, Desnues
    STANDARDS IN GENOMIC SCIENCES, 2014, 9 (03): : 956 - 969
  • [26] Non-contiguous finished genome sequence and description of Bacillus massilioalgeriensis sp nov.
    Bendjama, Esma
    Loucif, Lotfi
    Diene, Seydina M.
    Michelle, Caroline
    Gacemi-Kirane, Djamila
    Rolain, Jean-Marc
    STANDARDS IN GENOMIC SCIENCES, 2014, 9 (03):
  • [27] Non-contiguous finished genome sequence and description of Nosocomiicoccus massiliensis sp nov.
    Mishra, Ajay Kumar
    Edouard, Sophie
    Dangui, Nicole Prisca Makaya
    Lagier, Jean-Christophe
    Caputo, Aurelia
    Blanc-Tailleur, Caroline
    Ravaux, Isabelle
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2013, 9 (01): : 205 - 219
  • [28] Non-contiguous finished genome sequence and description of Clostridium dakarense sp nov.
    Lo, Cheikh Ibrahima
    Mishra, Ajay Kumar
    Padhmanabhan, Roshan
    Ba, Bissoume Samb
    Sow, Amy Gassama
    Robert, Catherine
    Couderc, Carine
    Faye, Ngor
    Raoult, Didier
    Fournier, Pierre-Edouard
    Fenollar, Florence
    STANDARDS IN GENOMIC SCIENCES, 2013, 9 (01): : 14 - 27
  • [29] Non-contiguous finished genome sequence and description of Paucisalibacillus algeriensis sp nov.
    Bendjama, Esma
    Loucif, Lotfi
    Diene, Seydina M.
    Michelle, Caroline
    Gacemi-Kirane, Djamila
    Rolain, Jean-Marc
    STANDARDS IN GENOMIC SCIENCES, 2014, 9 (03): : 1352 - 1365
  • [30] Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp nov.
    Roux, Veronique
    Million, Matthieu
    Robert, Catherine
    Magne, Alix
    Raoult, Didier
    STANDARDS IN GENOMIC SCIENCES, 2013, 9 (02): : 370 - 384