Non-contiguous finished genome sequence and description of Alistipes ihumii sp nov.

被引：9

作者：

Pfleiderer, Anne ^{[1
]}

Mishra, Ajay Kumar ^{[1
]}

Lagier, Jean-Christophe ^{[1
]}

Robert, Catherine ^{[1
]}

Caputo, Aurelia ^{[1
]}

Raoult, Didier ^{[1
,2
]}

Fournier, Pierre-Edouard ^{[1
]}

机构：

[1] Aix Marseille Univ, URMITE, Fac Med, UM63, Marseille, France

[2] King Abdulaziz Univ, King Fahd Med Res Ctr, Jeddah 21413, Saudi Arabia

来源：

STANDARDS IN GENOMIC SCIENCES | 2014年 / 9卷 / 03期

关键词：

Alistipes ihumii; genome; culturomics; taxono-genomics; GEN; NOV; BACTEROIDES-PUTREDINIS; MEMBER; CULTUROMICS; BACTERIA;

D O I：

10.4056/sigs.4698398

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Alistipes ihumii strain AP11(T) sp. nov. is the type strain of A. ihumii sp. nov., a new species within the genus Alistipes. This strain, whose genome is described here, was isolated from the fecal flora of a 21-year-old French Caucasian female, suffering from a severe restrictive form of anorexia nervosa since the age of 12 years. A. ihumii is a Gram-negative anaerobic bacillus. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,753,264 bp long genome (one chromosome but no plasmid) contains 2,254 protein-coding and 47 RNA genes, including 3 rRNA genes.

引用

页码：1221 / 1235

页数：17

共 50 条

[1] Non-contiguous finished genome sequence and description of Alistipes ihumii sp. nov.
Anne Pfleiderer
Ajay Kumar Mishra
Jean-Christophe Lagier
Catherine Robert
Aurelia Caputo
Didier Raoult
Pierre-Edouard Fournier
Standards in Genomic Sciences, 2014, 9 : 1221 - 1235
[2] Non-contiguous finished genome sequence and description of Clostridium ihumii sp nov.
Merhej, Vicky
Pfleiderer, Anne
Ramasamy, Dhamodharan
Lagier, Jean-Christophe
Michelle, Caroline
Raoult, Didier
Fournier, Pierre-Edouard
STANDARDS IN GENOMIC SCIENCES, 2015, 10
[3] Non-contiguous finished genome sequence and description of Alistipes timonensis sp nov.
Lagier, Jean-Christophe
Armougom, Fabrice
Mishra, Ajay Kumar
Thi-Tien Nguyen
Raoult, Didier
Fournier, Pierre-Edouard
STANDARDS IN GENOMIC SCIENCES, 2012, 6 (03): : 315 - 324
[4] Non-contiguous finished genome sequence and description of Alistipes timonensis sp. nov
Lagier J.-C.
Armougom F.
Mishra A.K.
Nguyen T.-T.
Raoult D.
Fournier P.-E.
Standards in Genomic Sciences, 2012, 6 (3) : 315 - 324
[5] Non-contiguous finished genome sequence and description of Bartonella florenciae sp nov.
Mediannikov, Oleg
El Karkouri, Khalid
Robert, Catherine
Fournier, Pierre-Edouard
Raoult, Didier
STANDARDS IN GENOMIC SCIENCES, 2013, 9 (01): : 185 - 196
[6] Non-contiguous finished genome sequence and description of Kurthia senegalensis sp nov.
Roux, Veronique
Lagier, Jean-Christophe
Gorlas, Aurore
Robert, Catherine
Raoult, Didier
STANDARDS IN GENOMIC SCIENCES, 2014, 9 (03): : 1319 - 1230
[7] Non-contiguous finished genome sequence and description of Bartonella senegalensis sp nov.
Mediannikov, Oleg
El Karkouri, Khalid
Diatta, Georges
Robert, Catherine
Fournier, Pierre-Edouard
Raoult, Didier
STANDARDS IN GENOMIC SCIENCES, 2013, 8 (02): : 279 - 289
[8] Non-contiguous finished genome sequence and description of Clostridium senegalense sp nov.
Mishra, Ajay Kumar
Lagier, Jean-Christophe
Robert, Catherine
Raoult, Didier
Fournier, Pierre-Edouard
STANDARDS IN GENOMIC SCIENCES, 2012, 6 (03): : 386 - 395
[9] Non-contiguous finished genome sequence and description of Paenibacillus senegalensis sp nov.
Mishra, Ajay Kumar
Lagier, Jean-Christophe
Rivet, Romain
Raoult, Didier
Fournier, Pierre-Edouard
STANDARDS IN GENOMIC SCIENCES, 2012, 7 (01): : 70 - 81
[10] Non-contiguous finished genome sequence and description of Anaerococcus senegalensis sp nov.
Lagier, Jean-Christophe
El Karkouri, Khalid
Thi-Tien Nguyen
Armougom, Fabrice
Raoult, Didier
Fournier, Pierre-Edouard
STANDARDS IN GENOMIC SCIENCES, 2012, 6 (01): : 116 - 125

← 1 2 3 4 5 →