Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia

被引:16
|
作者
Gusareva, Elena S. [1 ]
Gaultier, Nicolas P. E. [1 ]
Premkrishnan, Balakrishnan N., V [1 ]
Kee, Carmon [1 ]
Lim, Serene Boon Yuean [1 ]
Heinle, Cassie E. [1 ]
Purbojati, Rikky W. [1 ]
Nee, Ang Poh [1 ]
Lohar, Sachin R. [1 ]
Yanqing, Koh [1 ]
Kharkov, Vladimir N. [2 ]
Drautz-Moses, Daniela, I [1 ]
Stepanov, Vadim A. [2 ]
Schuster, Stephan C. [1 ]
机构
[1] Nanyang Technol Univ, Singapore Ctr Environm Life Sci Engn SCELSE, 60 Nanyang Dr, Singapore 637551, Singapore
[2] Russian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk 634050, Russia
关键词
BACTERIAL;
D O I
10.1038/s41598-020-78604-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Here, we describe taxonomical composition, as well as seasonal and diel dynamics of airborne microbial communities in West Siberia. A total of 78 airborne biomass samples from 39 time intervals were analysed, within a temperature range of 48 degrees C (26 degrees C to -22 degrees C). We observed a 5-170-fold decrease in DNA yield extracted from the airborne biomass in winter compared to summer, nevertheless, yielding sufficient material for metagenomic analysis. The airborne microbial communities included Actinobacteria and Proteobacteria, Ascomycota and Basidiomycota fungi as major components, as well as some Streptophyta plants. In summer, bacterial and fungal plant pathogens, and wood-rotting saprophytes were predominant. In winter, Ascomycota moulds and cold-related or stress environment bacterial species were enriched, while the fraction of wood-rotting and mushroom-forming Basidiomycota fungi was largely reduced. As recently reported for the tropical climate, the airborne microbial communities performed a diel cycle in summer, however, in winter diel dynamics were not observed.
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页数:7
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