An efficient isothermal PCR method for on-site detection of nucleic acid

被引:4
|
作者
Zhang, Shiyin [1 ,2 ,3 ]
Wang, Jin [1 ,2 ,3 ]
Zhuo, Zhihao [1 ,2 ,4 ]
Su, Xiaosong [1 ,2 ,3 ]
Chen, Mengyuan [1 ,2 ,3 ]
Chen, Wendi [1 ,2 ,3 ]
Li, Tingdong [1 ,2 ,3 ]
Zhang, Dongxu [1 ,2 ,3 ]
Min, Xiaoping [1 ,2 ,5 ]
Ge, Shengxiang [1 ,2 ,3 ]
Xia, Ningshao [1 ,2 ,3 ]
机构
[1] Xiamen Univ, State Key Lab Mol Vaccinol & Mol Diagnost, Xiamen 361102, Fujian, Peoples R China
[2] Xiamen Univ, Natl Inst Diagnost & Vaccine Dev Infect Dis, Xiamen 361102, Fujian, Peoples R China
[3] Xiamen Univ, Sch Publ Hlth, Xiamen 361702, Fujian, Peoples R China
[4] Xiamen Univ, Sch Life Sci, Xiamen 361102, Fujian, Peoples R China
[5] Xiamen Univ, Sch Informat Sci & Technol, Xiamen 361102, Fujian, Peoples R China
基金
中国国家自然科学基金;
关键词
convective PCR; isothermal PCR; molecular diagnostics; point-of-care-test; Rayleigh-Benard convection; NATURAL-CONVECTION; AMPLIFICATION; ASSAY;
D O I
10.2144/btn-2018-0190
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Convective PCR (CPCR) is an isothermal nucleic acid amplification technology; however, natural convection exhibits a chaotic and multiplex flow state, resulting in low amplification efficiency and specificity. We placed a polycarbonate strip (p-strip) inside reaction tubes to induce circumfluence by blocking the inner ring that originally allowed fluid to flow at suboptimal temperatures. Moreover, we constructed a dual-temperature instrument to provide appropriate denaturing and annealing zones for CPCR. Tubes containing p-strips exhibited significantly improved efficiency, sensitivity and specificity. For real-time detection, the variation coefficients of three replicates having the same concentrations were less than 2% in more than half of the cases, indicating improved CPCR amplification and potential as a commercial on-site nucleic acid diagnosis tool.
引用
收藏
页码:63 / 69
页数:7
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