BACKGROUND: Single-cell genomics is an approach to investigate cell heterogeneity and to identify new molecular features correlated with clinical outcomes. This approach allows identification of the complexity of cell diversity in a sample without the loss of information that occurs when multicellular or bulk tissue samples are analyzed. CONTENT: The first single-cell RNA-sequencing study was published in 2009, and since then many more studies and single-cell sequencing methods have been published. These studies have had a major impact on several fields, including microbiology, neurobiology, cancer, and developmental biology. Recently, improvements in reliability and the development of commercial single-cell isolation platforms are opening the potential of this technology to the clinical laboratory. SUMMARY: In this review we provide an overview of the current state of single-cell genomics. We describe opportunities in clinical research and medical applications. (C) 2019 American Association for Clinical Chemistry
机构:
Garvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
St George Hosp, Dept Oncol, Sydney, NSW, Australia
St Vincents Hosp, Kinghorn Canc Ctr, Sydney, NSW, Australia
Univ New South Wales, Fac Med, Sydney, NSW, AustraliaGarvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Lim, Jennifer
Chin, Venessa
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Garvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
St Vincents Hosp, Kinghorn Canc Ctr, Sydney, NSW, Australia
Univ New South Wales, Fac Med, Sydney, NSW, AustraliaGarvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Chin, Venessa
Fairfax, Kirsten
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Univ Tasmania, Sch Med, Hobart, AustraliaGarvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Fairfax, Kirsten
Moutinho, Catia
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Garvan Inst Med Res, Cellular Sci, Sydney, NSW, AustraliaGarvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Moutinho, Catia
Suan, Dan
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Garvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Univ Sydney, Westmead Clin Sch, Sydney, NSW, AustraliaGarvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Suan, Dan
Ji, Hanlee
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Stanford Univ, Sch Med, Palo Alto, CA USA
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA USAGarvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Ji, Hanlee
Powell, Joseph E.
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机构:
Garvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
Univ New South Wales, Fac Med, Sydney, NSW, Australia
Univ New South Wales, UNSW Cellular Genom Futures Inst, Sydney, NSW, AustraliaGarvan Inst Med Res, Cellular Sci, Sydney, NSW, Australia
机构:
Univ Wurzburg, Julius von Sachs Inst Biol Sci, Julius von Sachs Pl 3, D-97082 Wurzburg, GermanyUniv Wurzburg, Julius von Sachs Inst Biol Sci, Julius von Sachs Pl 3, D-97082 Wurzburg, Germany
Kamke, Janine
Bayer, Kristina
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Univ Wurzburg, Julius von Sachs Inst Biol Sci, Julius von Sachs Pl 3, D-97082 Wurzburg, GermanyUniv Wurzburg, Julius von Sachs Inst Biol Sci, Julius von Sachs Pl 3, D-97082 Wurzburg, Germany
Bayer, Kristina
Woyke, Tanja
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Joint Genome Inst, Dept Energy, Walnut Creek, CA USAUniv Wurzburg, Julius von Sachs Inst Biol Sci, Julius von Sachs Pl 3, D-97082 Wurzburg, Germany
Woyke, Tanja
Hentschel, Ute
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Univ Wurzburg, Julius von Sachs Inst Biol Sci, Julius von Sachs Pl 3, D-97082 Wurzburg, GermanyUniv Wurzburg, Julius von Sachs Inst Biol Sci, Julius von Sachs Pl 3, D-97082 Wurzburg, Germany
机构:
Samsung Med Ctr, Samsung Genome Inst, Seoul, South Korea
Sungkyunkwan Univ, Samsung Adv Inst Hlth Sci & Technol, Dept Digital Hlth, Seoul, South KoreaSamsung Med Ctr, Samsung Genome Inst, Seoul, South Korea
Hong, Tae Hee
Park, Woong-Yang
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Samsung Med Ctr, Samsung Genome Inst, Seoul, South Korea
Sungkyunkwan Univ, Samsung Adv Inst Hlth Sci & Technol, Dept Digital Hlth, Seoul, South Korea
Sungkyunkwan Univ, Sch Med, Dept Mol Cell Biol, Suwon, South Korea
GENINUS Inc, Seoul, South KoreaSamsung Med Ctr, Samsung Genome Inst, Seoul, South Korea