The complete chloroplast genome sequence of monotypic Cyphotheca (Melastomataceae), an endemic genus in China

被引：1
|
作者：
Wen, Zhenying [1 ]
Zeng, Sijin [2 ,3 ,4 ]
Li, Tingzhang [2 ,3 ]
Zhang, Guoqiang [2 ,3 ]
Peng, Donghui [1 ]
机构：
[1] Fujian Agr & Forestry Univ, Coll Landscape Architecture, 15 Shangxiadian St, Fuzhou 350002, Fujian, Peoples R China
[2] Natl Orchid Conservat Ctr China, Shenzhen Key Lab Orchid Conservat & Utilizat, Shenzhen, Peoples R China
[3] Orchid Conservat & Res Ctr Shenzhen, Shenzhen, Peoples R China
[4] South China Agr Univ, Coll Forestry & Landscape Architecture, South China Limestone Plants Res Ctr, Guangzhou, Guangdong, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词：
Cyphotheca montana; Melastomataceae; chloroplast genome; Illumina sequencing; phylogenetic analysis;
D O I：
10.1080/23802359.2019.1627932
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Cyphotheca, a shrub narrowly endemic to Yunnan, southwest China, is a monotypic genus of Sonerileae in Melastomataceae. The species, Cyphotheca montana, is dwindling and is listed as 'Near Threatened (NT)' by IUCN Red List of China. Herein, we report the complete chloroplast genome (cpDNA) sequence assembled from Illumina pair-end sequencing data. The complete chloroplast genome was 156,424 bp in length, which includes two inverted repeat regions (IRs) of 26,776 bp each, which were separated by a large single copy region (LSC) 85,900 bp and a small single copy region (SSC) 16,972 bp. The chloroplast genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content in the chloroplast genome of C. montana was 37.0%. The phylogenomic analysis showed that C. montana is sister to Barthea barthei.
引用
收藏
页码：2295 / 2296
页数：2
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