Citizen-centered, auditable and privacy-preserving population genomics

被引:13
|
作者
Grishin, Dennis [1 ,2 ]
Raisaro, Jean Louis [3 ,4 ,5 ]
Troncoso-Pastoriza, Juan Ramon [6 ]
Obbad, Kamal [2 ]
Quinn, Kevin [2 ]
Misbach, Mickael [6 ]
Gollhardt, Jared [2 ]
Sa, Joao [6 ]
Fellay, Jacques [3 ,4 ,7 ]
Church, George M. [1 ]
Hubaux, Jean-Pierre [6 ]
机构
[1] Harvard Med Sch, Dept Genet, Boston, MA 02115 USA
[2] Nebula Genom Inc, San Francisco, CA 94103 USA
[3] Univ Lausanne Hosp, Precis Med Unit, Lausanne, Switzerland
[4] Univ Lausanne, Lausanne, Switzerland
[5] Univ Lausanne Hosp, Div Informat Syst, Data Sci Grp, Lausanne, Switzerland
[6] Ecole Polytech Federale Lausanne, Sch Comp & Commun Sci, Lausanne, Switzerland
[7] Ecole Polytech Federale Lausanne, Sch Life Sci, Lausanne, Switzerland
来源
NATURE COMPUTATIONAL SCIENCE | 2021年 / 1卷 / 03期
关键词
CryptoGraphics - Data access - Genomics - Genomics database - Health data - Ho-momorphic encryptions - Homomorphic-encryptions - Privacy concerns - Privacy preserving - Secure multi-party computation;
D O I
10.1038/s43588-021-00044-9
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
The growing number of health-data breaches, the use of genomic databases for law enforcement purposes and the lack of transparency of personal genomics companies are raising unprecedented privacy concerns. To enable a secure exploration of genomic datasets with controlled and transparent data access, we propose a citizen-centric approach that combines cryptographic privacy-preserving technologies, such as homomorphic encryption and secure multi-party computation, with the auditability of blockchains. Our open-source implementation supports queries on the encrypted genomic data of hundreds of thousands of individuals, with minimal overhead. We show that real-world adoption of our system alleviates widespread privacy concerns and encourages data access sharing with researchers.
引用
收藏
页码:192 / 198
页数:7
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