Changes in circular RNA expression patterns during human foetal brain development

被引:46
|
作者
Chen, Bei Jun [1 ]
Huang, Suleigh [1 ]
Janitz, Michael [1 ,2 ]
机构
[1] Univ New South Wales, Sch Biotechnol & Biomol Sci, Sydney, NSW 2052, Australia
[2] Univ Leipzig, Paul Flechsig Inst Brain Res, Leipzig, Germany
关键词
Circular RNAs; Transcriptome; RNA-seq; Human embryonic brain; Development; LONG NONCODING RNAS; REVEALS; RIM1-ALPHA; GENE; TRANSCRIPTOME; INSIGHTS; ABUNDANT; TOPHAT; SEQ;
D O I
10.1016/j.ygeno.2018.04.015
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Circular RNAs (circRNAs) are a recently identified class of long non-coding RNAs and their expression is regulated in a tissue- and developmental stage-specific manner. Recent studies indicate the potential regulatory role that circRNAs may have, particularly in the brain, where they are most abundant. This study aims to elucidate changes in circRNA patterns during human embryonic brain development. We detected a number of differentially expressed genes that showed distinct expression profiles for circular and linear transcripts despite having originated from the same genes, implicating a dichotomy in the regulation of these two RNA species. Altogether our study showed that circular and linear RNAs have independent expression patterns, and that circular transcriptomes from different developing stages have distinct characteristics in terms of transcript abundance and isoform diversity.
引用
收藏
页码:753 / 758
页数:6
相关论文
共 50 条
  • [41] Expression pattern of α-synuclein during human brain development.
    Sterrenburg, MD
    de Kruijff, LGM
    White, CL
    Rogers, B
    Hladik, CL
    Raghavan, R
    JOURNAL OF PATHOLOGY, 2001, 193 : 41A - 41A
  • [42] Expression of Connexin 43 in the Porcine Foetal Gonads During Development
    Knapczyk-Stwora, K.
    Durlej-Grzesiak, M.
    Duda, M.
    Slomczynska, M.
    REPRODUCTION IN DOMESTIC ANIMALS, 2013, 48 (02) : 272 - 277
  • [43] Metallothionein expression during wool follicle development in foetal sheep
    Nishimura, H
    Nishimura, N
    Tohyama, C
    Cam, GR
    Adelson, DL
    METALLOTHIONEIN IV, 1999, : 321 - 324
  • [44] Temporal changes in the gene expression heterogeneity during brain development and aging
    Ulaş Işıldak
    Mehmet Somel
    Janet M. Thornton
    Handan Melike Dönertaş
    Scientific Reports, 10
  • [45] Temporal changes in the gene expression heterogeneity during brain development and aging
    Isildak, Ulas
    Somel, Mehmet
    Thornton, Janet M.
    Donertas, Handan Melike
    SCIENTIFIC REPORTS, 2020, 10 (01)
  • [46] Design Principles for AAV Mediated Circular RNA Expression in the Brain
    Gonzalez, Trevor J.
    Meganck, Rita
    Fanous, Marco
    Simon, Kate
    Asokan, Aravind
    MOLECULAR THERAPY, 2019, 27 (04) : 60 - 60
  • [47] Reduction of circular RNA expression associated with human retinoblastoma
    Lyu, Jiao
    Wang, Yu
    Zheng, Qiupeng
    Hua, Peiyan
    Zhu, Xiuyu
    Li, Jiakai
    Li, Jing
    Ji, Xunda
    Zhao, Peiquan
    EXPERIMENTAL EYE RESEARCH, 2019, 184 : 278 - 285
  • [48] Circular RNA expression profiles of mouse ovaries during postnatal development and the function of circular RNA epidermal growth factor receptor in granulosa cells
    Jia, Wenchao
    Xu, Bo
    Wu, Ji
    METABOLISM-CLINICAL AND EXPERIMENTAL, 2018, 85 : 192 - 204
  • [49] CHANGES IN ONCOGENE MESSENGER-RNA EXPRESSION DURING HUMAN KERATINOCYTE DIFFERENTIATION
    SHARPE, GR
    FISHER, C
    REDFERN, CPF
    ARCHIVES OF DERMATOLOGICAL RESEARCH, 1994, 286 (08) : 476 - 480
  • [50] Expression patterns of Neil3 during embryonic brain development and neoplasia
    Hildrestrand, Gunn A.
    Neurauter, Christine G.
    Diep, Dzung B.
    Castellanos, Cesilie G.
    Krauss, Stefan
    Bjoras, Magnar
    Luna, Luisa
    BMC NEUROSCIENCE, 2009, 10