PlantDB - a versatile database for managing plant research

被引:17
|
作者
Exner, Vivien
Hirsch-Hoffmann, Matthias
Gruissem, Wilhelm
Hennig, Lars [1 ]
机构
[1] ETH, Inst Plant Sci, CH-8092 Zurich, Switzerland
关键词
D O I
10.1186/1746-4811-4-1
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Background: Research in plant science laboratories often involves usage of many different species, cultivars, ecotypes, mutants, alleles or transgenic lines. This creates a great challenge to keep track of the identity of experimental plants and stored samples or seeds. Results: Here, we describe PlantDB - a Microsoft (R) Office Access database - with a user-friendly front-end for managing information relevant for experimental plants. PlantDB can hold information about plants of different species, cultivars or genetic composition. Introduction of a concise identifier system allows easy generation of pedigree trees. In addition, all information about any experimental plant - from growth conditions and dates over extracted samples such as RNA to files containing images of the plants - can be linked unequivocally. Conclusion: We have been using PlantDB for several years in our laboratory and found that it greatly facilitates access to relevant information.
引用
收藏
页数:5
相关论文
共 50 条
  • [31] Managing data provenance in database
    Liu, Xiping
    Wan, Changxuan
    Jiang, Tengjiao
    Journal of Information and Computational Science, 2009, 6 (01): : 423 - 431
  • [32] MANAGING THE VERY LARGE DATABASE
    POLK, WJ
    BYRD, K
    DATAMATION, 1981, 27 (10): : 115 - +
  • [33] Managing the ADS citation database
    Rey-Bakaikoa, V
    Accomazzi, A
    Eichhorn, G
    Grant, CS
    ASTRONOMICAL DATA ANALYSIS SOFTWARE AND SYSTEMS XI, 2002, 281 : 471 - 474
  • [34] Database architecture for a versatile scheduling tool
    Raghavan, JS
    ISWS '05: Proceedings of the 2005 International Symposium on Web Services and Applications, 2005, : 176 - 179
  • [35] The Plant Parasitic Nematodes Database: A Comprehensive Genomic Data Platform for Plant Parasitic Nematode Research
    Zhuge, Junhao
    Zhou, Xiang
    Zhou, Lifeng
    Hu, Jiafu
    Guo, Kai
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (23)
  • [36] PGSB PlantsDB: updates to the database framework for comparative plant genome research
    Spannagl, Manuel
    Nussbaumer, Thomas
    Bader, Kai C.
    Martis, Mihaela M.
    Seidel, Michael
    Kugler, Karl G.
    Gundlach, Heidrun
    Mayer, Klaus F. X.
    NUCLEIC ACIDS RESEARCH, 2016, 44 (D1) : D1141 - D1147
  • [37] VERSATILE AUTOMATIC PLATING PLANT
    不详
    PROCESS CONTROL AND AUTOMATION, 1966, 13 (02): : 40 - &
  • [38] VERSATILE IN-PLANT TRANSPORTATION
    不详
    FOOD ENGINEERING, 1970, 42 (10): : 77 - +
  • [39] Myrtle: a versatile medicinal plant
    Gorjian, Hayedeh
    Khaligh, Nader Ghaffari
    NUTRIRE, 2023, 48 (01)
  • [40] A VERSATILE PLANT + CULTIVATING RICE
    不详
    UNESCO COURIER, 1984, (12) : 37 - 37