OmicBrowse: a Flash-based high-performance graphics interface for genomic resources

被引：1

作者：

Matsushima, Akihiro ^{[1
]}

Kobayashi, Norio ^{[1
]}

Mochizuki, Yoshiki ^{[1
]}

Ishii, Manabu ^{[1
]}

Kawaguchi, Shuji ^{[1
]}

Endo, Takaho A. ^{[1
]}

Umetsu, Ryo ^{[1
]}

Makita, Yuko ^{[1
]}

Toyoda, Tetsuro ^{[1
]}

机构：

[1] RIKEN, Inst Phys & Chem Res, Bioinformat & Syst Engn Div BASE, Kanagawa 2300045, Japan

来源：

NUCLEIC ACIDS RESEARCH | 2009年 / 37卷

关键词：

TILING ARRAY; DATABASE; ARABIDOPSIS; INFORMATION; BROWSER; BIOLOGY; TRANSCRIPTOME; ANNOTATION; PROJECT; GENE;

D O I：

10.1093/nar/gkp404

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

OmicBrowse is a genome browser designed as a scalable system for maintaining numerous genome annotation datasets. It is an open source tool capable of regulating multiple user data access to each dataset to allow multiple users to have their own integrative view of both their unpublished and published datasets, so that the maintenance costs related to supplying each collaborator exclusively with their own private data are significantly reduced. OmicBrowse supports DAS1 imports and exports of annotations to Internet site servers worldwide. We also provide a data-download named OmicDownload server that interactively selects datasets and filters the data on the selected datasets. Our OmicBrowse server has been freely available at http://omicspace.riken.jp/ since its launch in 2003. The OmicBrowse source code is downloadable from http://sourceforge.net/projects/omicbrowse/.

引用

页码：W57 / W62

页数：6

共 50 条

[31] Analytic models for flash-based SSD performance when subject to trimming
Verschoren, R.
Van Houdt, B.
2016 32ND SYMPOSIUM ON MASS STORAGE SYSTEMS AND TECHNOLOGIES (MSST), 2016,
[32] RESOURCES ON HIGH-PERFORMANCE ORGANIZATIONS
不详
TRAINING & DEVELOPMENT, 1995, 49 (11): : 10 - 10
[33] A SCALABLE HIGH-PERFORMANCE GRAPHICS PROCESSOR - GVIP
IKEDO, T
VISUAL COMPUTER, 1995, 11 (03): : 121 - 133
[34] THE ARCHITECTURAL EVOLUTION OF A HIGH-PERFORMANCE GRAPHICS TERMINAL
DOORNINK, DJ
DALRYMPLE, JC
IEEE COMPUTER GRAPHICS AND APPLICATIONS, 1984, 4 (04) : 47 - 54
[35] DESIGNING SOFTWARE FOR HIGH-PERFORMANCE GRAPHICS.
Burns, Robert R.
Luck, Dale A.
1600, (34):
[36] High-Performance Polynomial Root Finding for Graphics
Yuksel, Cem
PROCEEDINGS OF THE ACM ON COMPUTER GRAPHICS AND INTERACTIVE TECHNIQUES, 2022, 5 (03)
[37] HIGH-PERFORMANCE COLOUR GRAPHICS CONTROLLER.
Adams, John
1600, (93):
[38] HIGH-PERFORMANCE COMPUTER-GRAPHICS FOR THE EVERYMAN
MANTLE, MW
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1982, 183 (MAR): : 36 - COMP
[39] A design for high-performance flash disks
Birrell, Andrew
Isard, Michael
Thacker, Chuck
Wobber, Ted
Operating Systems Review (ACM), 2007, 41 (02): : 88 - 93
[40] HIGH-PERFORMANCE GRAPHICS VIA SILICON COMPILATION
JONES, M
BAILEY, M
VLSI SYSTEMS DESIGN, 1987, 8 (03): : 32 - &

← 1 2 3 4 5 →