H-L curve: A Novel 2D Graphical Representation of Protein Sequences

被引：0

作者：

Li, Yongfan ^{[1
]}

Huang, Guohua ^{[2
]}

Liao, Bo ^{[2
]}

Liu, Zanbo ^{[2
]}

机构：

[1] Hunan First Normal Coll, Changsha 410002, Hunan, Peoples R China

[2] Hunan Univ, Sch Comp & Commun, Changsha 410082, Hunan, Peoples R China

来源：

MATCH-COMMUNICATIONS IN MATHEMATICAL AND IN COMPUTER CHEMISTRY | 2009年 / 61卷 / 02期

关键词：

DNA; SIMILARITY; ALIGNMENT;

D O I：

暂无

中图分类号：

O6 [化学];

学科分类号：

0703 ;

摘要：

According to the partial order constructed on a selected pair of physico-chemical properties of amino acids, we presented a novel 2D graphical representation of protein sequences which is called an H-L curve. The representations are mathematically proven to be no circuit (i.e., without any degeneracy), and associated with protein sequences in a one-to-one manner. In addition, our graphical curves allow more conveniently a visual inspection of protein sequences alignment. We illustrated our approach on two examples.

引用

页码：519 / 532

页数：14

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