Current scenario of the genetic testing for rare neurological disorders exploiting next generation sequencing
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作者:
Di Resta, Chiara
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Univ Vita Salute San Raffaele, Milan, Italy
IRCCS San Raffaele Sci Inst, Div Genet & Cell Biol, Unit Genom Human Dis Diag, Milan, ItalyUniv Vita Salute San Raffaele, Milan, Italy
Di Resta, Chiara
[1
,2
]
Pipitone, Giovanni Battista
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IRCCS San Raffaele Hosp, Clin Mol Biol Lab, Milan, ItalyUniv Vita Salute San Raffaele, Milan, Italy
Pipitone, Giovanni Battista
[3
]
Carrera, Paola
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IRCCS San Raffaele Sci Inst, Div Genet & Cell Biol, Unit Genom Human Dis Diag, Milan, Italy
IRCCS San Raffaele Hosp, Clin Mol Biol Lab, Milan, ItalyUniv Vita Salute San Raffaele, Milan, Italy
Carrera, Paola
[2
,3
]
Ferrari, Maurizio
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Univ Vita Salute San Raffaele, Milan, Italy
IRCCS San Raffaele Sci Inst, Div Genet & Cell Biol, Unit Genom Human Dis Diag, Milan, Italy
IRCCS San Raffaele Hosp, Clin Mol Biol Lab, Milan, ItalyUniv Vita Salute San Raffaele, Milan, Italy
Ferrari, Maurizio
[1
,2
,3
]
机构:
[1] Univ Vita Salute San Raffaele, Milan, Italy
[2] IRCCS San Raffaele Sci Inst, Div Genet & Cell Biol, Unit Genom Human Dis Diag, Milan, Italy
Next generation sequencing is currently a cornerstone of genetic testing in routine diagnostics, allowing for the detection of sequence variants with so far unprecedented large scale, mainly in genetically heterogenous diseases, such as neurological disorders. It is a fast-moving field, where new wet enrichment protocols and bioinformatics tools are constantly being developed to overcome initial limitations. Despite the as yet undiscussed advantages, however, there are still some challenges in data analysis and the interpretation of variants. In this review, we address the current state of next generation sequencing diagnostic testing for inherited human disorders, particularly giving an overview of the available high-throughput sequencing approaches; including targeted, whole-exome and whole-genome sequencing; and discussing the main critical aspects of the bioinformatic process, from raw data analysis to molecular diagnosis.
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Stellenbosch Univ, Fac Med & Hlth Sci, Dept Paediat & Child Hlth, Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, Dept Paediat & Child Hlth, Cape Town, South Africa
van Niekerk, Magriet
Moosa, Shahida
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Stellenbosch Univ, Fac Med & Hlth Sci, Div Mol Biol & Human Genet, Cape Town, South Africa
Tygerberg Hosp, Med Genet, Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, Dept Paediat & Child Hlth, Cape Town, South Africa
Moosa, Shahida
van Toorn, Ronald
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Stellenbosch Univ, Fac Med & Hlth Sci, Dept Paediat & Child Hlth, Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, Dept Paediat & Child Hlth, Cape Town, South Africa
van Toorn, Ronald
Solomons, Regan
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Stellenbosch Univ, Fac Med & Hlth Sci, Dept Paediat & Child Hlth, Cape Town, South AfricaStellenbosch Univ, Fac Med & Hlth Sci, Dept Paediat & Child Hlth, Cape Town, South Africa