Detecting RNA sequences using two-stage SVM classifier

被引:0
|
作者
Li, Xiaoou [1 ]
Li, Kang [2 ]
机构
[1] CINVESTAV, IPN, Dept Comput, AP 14-740,Av IPN 2508, Mexico City 07360, DF, Mexico
[2] Queens Univ Belfast, Schl Elect, Dept Elect Engn & Comp Sci, Belfast BT9 5AH, Antrim, North Ireland
关键词
D O I
10.1007/978-3-540-74771-0_2
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
RNA sequences detection is time-consuming because of its huge data set size. Although SVM has been proved to be useful, normal SVM is not suitable for classification of large data sets because of its high training complexity. A two-stage SVM classification approach is introduced for fast classifying large data sets. Experimental results on several RNA sequences detection demonstrate that the proposed approach is promising for such applications.
引用
收藏
页码:8 / +
页数:4
相关论文
共 50 条
  • [31] Two-stage binary classifier for neuromuscular disorders using surface electromyography feature extraction and selection
    Lee, Jun-Woo
    Shin, Myung-Jun
    Jang, Myung-Hun
    Jeong, Weui-Bong
    Ahn, Se-Jin
    MEDICAL ENGINEERING & PHYSICS, 2021, 98 : 65 - 72
  • [32] Lithography Hotspot Detection by Two-stage Cascade Classifier using Histogram of Oriented Light Propagation
    Tomioka, Yoichi
    Matsunawa, Tetsuaki
    Kodama, Chikaaki
    Nojima, Shigeki
    2017 22ND ASIA AND SOUTH PACIFIC DESIGN AUTOMATION CONFERENCE (ASP-DAC), 2017, : 81 - 86
  • [33] A Modified Two-Stage SVM-RFE Model for Cancer Classification Using Microarray Data
    Tan, Phit Ling
    Tan, Shing Chiang
    Lim, Chee Peng
    Khor, Swee Eng
    NEURAL INFORMATION PROCESSING, PT I, 2011, 7062 : 668 - +
  • [34] Two-stage dimensional emotion recognition by fusing predictions of acoustic and text networks using SVM
    Atmaja, Bagus Tris
    Akagi, Masato
    SPEECH COMMUNICATION, 2021, 126 : 9 - 21
  • [35] BotCensor: Detecting DGA-Based Botnet Using Two-Stage Anomaly Detection
    Biao Qi
    Jiang Jianguo
    Shi Zhixin
    Rui Mao
    Wang Qiwen
    2018 17TH IEEE INTERNATIONAL CONFERENCE ON TRUST, SECURITY AND PRIVACY IN COMPUTING AND COMMUNICATIONS (IEEE TRUSTCOM) / 12TH IEEE INTERNATIONAL CONFERENCE ON BIG DATA SCIENCE AND ENGINEERING (IEEE BIGDATASE), 2018, : 754 - 762
  • [36] Hybrid IDS using SVM classifier for Detecting DoS attack in MANET Application
    Justin, Vijin
    Marathe, Nilesh
    Dongre, Nilima
    2017 INTERNATIONAL CONFERENCE ON I-SMAC (IOT IN SOCIAL, MOBILE, ANALYTICS AND CLOUD) (I-SMAC), 2017, : 775 - 778
  • [37] Learning to Generate Radar Image Sequences Using Two-Stage Generative Adversarial Networks
    Zhang, Chenyang
    Yang, Xuebing
    Tang, Yongqiang
    Zhang, Wensheng
    IEEE GEOSCIENCE AND REMOTE SENSING LETTERS, 2020, 17 (03) : 401 - 405
  • [38] A two-stage classifier for identification of protein-protein interface residues
    Yan, Changhui
    Dobbs, Drena
    Honavar, Vasant
    BIOINFORMATICS, 2004, 20 : 371 - 378
  • [39] Two-stage Hybrid Classifier Ensembles for Subcellular Phenotype Images Classification
    Zhang, Bailing
    2011 INTERNATIONAL CONFERENCE ON ENVIRONMENT SCIENCE AND BIOTECHNOLOGY (ICESB 2011), 2011, 8 : 554 - 562
  • [40] Two-stage binary classifier with fuzzy-valued loss function
    Robert Burduk
    Marek Kurzyński
    Pattern Analysis and Applications, 2006, 9 : 353 - 358