Isolation and characterization of polymorphic microsatellite markers in Metasequoia glyptostroboides (Taxodiaceae)

被引:6
|
作者
Cui, Min-Yan [1 ]
Yu, Shuo [1 ]
Liu, Min [1 ]
Li, Yuan-Yuan [1 ,2 ]
机构
[1] E China Normal Univ, Dept Environm Sci, Shanghai Key Lab Ecol Proc & Restorat, Shanghai 200062, Peoples R China
[2] Tiantong State Observat Stn Forest Ecosyst, Shanghai 200062, Peoples R China
基金
中国国家自然科学基金;
关键词
Metasequoia glyptostroboides; Microsatellite loci; Conservation; Genetic diversity; POPULATIONS; RAPD;
D O I
10.1007/s12686-009-9132-6
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
Metasequoia glyptostroboides is an endangered plant endemic to China. Eleven polymorphic microsatellite loci were successfully isolated from M. glyptostroboides. The number of alleles per locus ranged from 2 to 6. The observed (H(O)) and expected (H(E)) heterozygosities ranged from 0.1842 to 0.8421 and 0.2389 to 0.6639, respectively. Polymorphism information content ranged from 0.2172 to 0.5901. No significant linkage disequilibrium was observed between the loci. Four loci showed significant deviations from Hardy-Weinberg equilibrium. These 11 effective primer pairs are expected to be useful for further studies on population genetics, mating system analysis, and conservation genetics in M. glyptostroboides.
引用
收藏
页码:19 / 21
页数:3
相关论文
共 50 条
  • [21] Isolation and characterization of polymorphic microsatellite markers in the endangered Nothotsuga longibracteata (Pinaceae)
    Qiu, Yingjun
    Kang, Ming
    Ning, Zulin
    Zeng, Shaohua
    Huang, Hongwen
    MOLECULAR ECOLOGY NOTES, 2007, 7 (06): : 1335 - 1337
  • [22] Isolation and characterization of 12 polymorphic microsatellite markers for the frog Pelophylax hubeiensis
    Yan, J. -C.
    Zhu, F. -H.
    Wu, H. -L.
    GENETICS AND MOLECULAR RESEARCH, 2011, 10 (01): : 268 - 272
  • [23] Isolation and characterization of polymorphic microsatellite markers for blue fox (Alopex lagopus)
    Li, Y. M.
    Guo, P. C.
    Lu, J. Y.
    Bai, C. Y.
    Zhao, Z. H.
    Yan, S. Q.
    GENETICS AND MOLECULAR RESEARCH, 2016, 15 (02)
  • [24] Isolation and Characterization of Polymorphic Microsatellite Markers for the Black Rockfish Sebastes inermis
    An, Hye Suck
    Kim, Kwang Soo
    Lee, Hae Yeong
    Kim, Eun Mi
    Kwon, Mun Gyeong
    GENES & GENOMICS, 2009, 31 (01) : 29 - 34
  • [25] Isolation and characterization of highly polymorphic microsatellite markers in Hypochaeris radicata (Asteraceae)
    Mix, C
    Arens, PFP
    Ouborg, NJ
    Smulders, MJM
    MOLECULAR ECOLOGY NOTES, 2004, 4 (04): : 656 - 658
  • [26] ISOLATION AND CHARACTERIZATION OF 20 POLYMORPHIC MICROSATELLITE MARKERS FOR JUGLANS MANDSHURICA (JUGLANDACEAE)
    Chen, Chang-Mei
    Han, Shi-Jie
    Yuan, Shu-Sheng
    Wang, Chun-Jing
    Yu, Jing-Hua
    APPLICATIONS IN PLANT SCIENCES, 2013, 1 (07):
  • [27] Isolation and characterization of polymorphic microsatellite DNA markers for Banksia candolleana (Proteaceae)
    Merwin, Laura
    He, Tianhua
    Krauss, Siegfried L.
    CONSERVATION GENETICS RESOURCES, 2010, 2 : 345 - 347
  • [28] Isolation and characterization of polymorphic microsatellite markers in Abudefduf luridus (Pisces: Pomacentridae)
    Carvalho, MC
    Streiff, R
    Guillemaud, T
    Afonso, P
    Santos, RS
    Cancela, ML
    MOLECULAR ECOLOGY, 2000, 9 (07) : 993 - 994
  • [29] Isolation and characterization of polymorphic microsatellite markers for the river sleeper (Odontobutis potamophila)
    Li, Qiang
    Wang, XiaoBing
    Liu, Zhi-Zhi
    CONSERVATION GENETICS RESOURCES, 2015, 7 (01) : 251 - 253
  • [30] Isolation and characterization of 10 polymorphic dinucleotide microsatellite markers for llama and guanaco
    Bustamante, AV
    Maté, ML
    Zambelli, A
    Vidal-Rioja, L
    MOLECULAR ECOLOGY NOTES, 2003, 3 (01): : 68 - 69