Genetic algorithm;
Epidemic model;
Partial fitting;
Second wave;
D O I:
10.6180/jase.202112_24(6).0011
中图分类号:
T [工业技术];
学科分类号:
08 ;
摘要:
We present an SIRD epidemic modelling for COVID-19 outbreak in the ASEAN member countries. The occurrence of a second wave in the region adds complexity to the parameter estimation of the SIRD model. In this case, a standard genetic algorithm cannot fully capture the dynamic transmission of the pandemic. We therefore introduce a genetic partial fitting algorithm (GPFA) of seven-day intervals. We show that our method outperforms the standard algorithm with a significant reduction in the Root Mean Square Error (RMSE) value. We also extend our study to produce a real-time estimation of the effective reproduction number with a confidence interval to incorporate uncertainties in the model.
机构:
Univ Padjadjaran, Dept Stat, Sumedang, Indonesia
Univ Groningen, Fac Spatial Sci, Groningen, NetherlandsUniv Padjadjaran, Dept Stat, Sumedang, Indonesia
Jaya, I. G. N. M.
Chadidjah, A.
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机构:
Univ Padjadjaran, Dept Stat, Sumedang, IndonesiaUniv Padjadjaran, Dept Stat, Sumedang, Indonesia
Chadidjah, A.
Sunengsih, N.
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机构:
Univ Padjadjaran, Dept Stat, Sumedang, IndonesiaUniv Padjadjaran, Dept Stat, Sumedang, Indonesia
Sunengsih, N.
Arisanti, R.
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机构:
Univ Padjadjaran, Dept Stat, Sumedang, IndonesiaUniv Padjadjaran, Dept Stat, Sumedang, Indonesia
机构:
Anqing Normal Univ, Sch Life Sci, 1318 North Jixian Rd, Anqing 246011, Anhui, Peoples R China
Nanjing Univ Sci & Technol, Sch Environm & Biol Engn, 200 Xiaolingwei St, Nanjing 210094, Jiangsu, Peoples R ChinaAnqing Normal Univ, Sch Life Sci, 1318 North Jixian Rd, Anqing 246011, Anhui, Peoples R China
Sun Tingzhe
Weng Dan
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机构:
Anqing Normal Univ, Sch Life Sci, 1318 North Jixian Rd, Anqing 246011, Anhui, Peoples R China
Nanjing Univ Sci & Technol, Sch Environm & Biol Engn, 200 Xiaolingwei St, Nanjing 210094, Jiangsu, Peoples R ChinaAnqing Normal Univ, Sch Life Sci, 1318 North Jixian Rd, Anqing 246011, Anhui, Peoples R China
机构:
Beijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R ChinaBeijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R China
Qiu, Zhenzhen
Sun, Youyi
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机构:
Beijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R ChinaBeijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R China
Sun, Youyi
He, Xuan
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机构:
Beijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R ChinaBeijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R China
He, Xuan
Wei, Jing
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h-index: 0
机构:
Beijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R ChinaBeijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R China
Wei, Jing
Zhou, Rui
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机构:
Beijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R ChinaBeijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R China
Zhou, Rui
Bai, Jie
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h-index: 0
机构:
Beijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R ChinaBeijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R China
Bai, Jie
Du, Shouying
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机构:
Beijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R ChinaBeijing Univ Chinese Med, Sch Chinese Mat Med, Beijing 102488, Peoples R China
机构:
Univ Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Hosp Reg Lambayeque, Oficina Epidemiol, Chiclayo 14012, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Valladares-Garrido, Mario J.
Eduardo Zapata-Castro, Luis
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl Piura, Escuela Med, Piura 20002, Peru
Univ Nacl Piura, Sci Soc Med Students, Piura 20002, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Eduardo Zapata-Castro, Luis
Karina Picon-Reategui, Cinthia
论文数: 0引用数: 0
h-index: 0
机构:
Univ San Martin de Porres, Escuela Med, Chiclayo 15011, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Karina Picon-Reategui, Cinthia
Paula Mesta-Pintado, Ana
论文数: 0引用数: 0
h-index: 0
机构:
Univ San Martin de Porres, Escuela Med, Chiclayo 15011, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Paula Mesta-Pintado, Ana
Alberto Picon-Reategui, Ronald
论文数: 0引用数: 0
h-index: 0
机构:
Univ San Martin de Porres, Escuela Med, Chiclayo 15011, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Alberto Picon-Reategui, Ronald
Huaman-Garcia, Mariana
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cesar Vallejo, Escuela Med, Piura 13001, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Huaman-Garcia, Mariana
Johan Pereira-Victorio, Cesar
论文数: 0引用数: 0
h-index: 0
机构:
Univ Continental, Sch Med, Lima 15046, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Johan Pereira-Victorio, Cesar
Valladares-Garrido, Danai
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cesar Vallejo, Escuela Med, Piura 13001, Peru
Hosp Apoyo II Santa Rosa, Unidad Epidemiol & Salud Ambiental, Piura 20008, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru
Valladares-Garrido, Danai
Failoc-Rojas, Virgilio E.
论文数: 0引用数: 0
h-index: 0
机构:
Univ San Ignacio de Loyola, Res Unit Generat & Synth Evidence Hlth, Lima 15024, PeruUniv Norbert Wiener, South Amer Ctr Educ & Res Publ Hlth, Lima 15046, Peru