Semantic Segmentation of Urinary Bladder Cancer Masses from CT Images: A Transfer Learning Approach

被引:8
|
作者
Segota, Sandi Baressi [1 ]
Lorencin, Ivan [1 ]
Smolic, Klara [2 ]
Andelic, Nikola [1 ]
Markic, Dean [2 ,3 ]
Mrzljak, Vedran [1 ]
Stifanic, Daniel [1 ]
Musulin, Jelena [1 ]
Spanjol, Josip [2 ,3 ]
Car, Zlatan [1 ]
机构
[1] Univ Rijeka, Fac Engn, Vukovarska 58, Rijeka 51000, Croatia
[2] Clin Hosp Ctr Rijeka, Kresimirova 42, Rijeka 51000, Croatia
[3] Fac Med, Branchetta 20-1, Rijeka 51000, Croatia
来源
BIOLOGY-BASEL | 2021年 / 10卷 / 11期
关键词
artificial intelligence; computer tomography; machine learning; semantic segmentation; urinary bladder cancer; RISK-FACTORS; UNET; CARCINOMA;
D O I
10.3390/biology10111134
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Simple Summary: Bladder cancer is a common cancer of the urinary tract, characterized by high metastatic potential and recurrence. The research applies a transfer learning approach on CT images (frontal, axial, and saggital axes) for the purpose of semantic segmentation of areas affected by bladder cancer. A system consisting of AlexNet network for plane recognition, using transfer learning-based U-net networks for the segmentation task. Achieved results show that the proposed system has a high performance, suggesting possible use in clinical practice. Abstract: Urinary bladder cancer is one of the most common cancers of the urinary tract. This cancer is characterized by its high metastatic potential and recurrence rate. Due to the high metastatic potential and recurrence rate, correct and timely diagnosis is crucial for successful treatment and care. With the aim of increasing diagnosis accuracy, artificial intelligence algorithms are introduced to clinical decision making and diagnostics. One of the standard procedures for bladder cancer diagnosis is computer tomography (CT) scanning. In this research, a transfer learning approach to the semantic segmentation of urinary bladder cancer masses from CT images is presented. The initial data set is divided into three sub-sets according to image planes: frontal (4413 images), axial (4993 images), and sagittal (996 images). First, AlexNet is utilized for the design of a plane recognition system, and it achieved high classification and generalization performances with an (AUC(micro)) over bar of 0.9999 and sigma(AUC(micro)) of 0.0006. Furthermore, by applying the transfer learning approach, significant improvements in both semantic segmentation and generalization performances were achieved. For the case of the frontal plane, the highest performances were achieved if pre-trained ResNet101 architecture was used as a backbone for U-net with (DSC) over bar up to 0.9587 and sigma(DSC) of 0.0059. When U-net was used for the semantic segmentation of urinary bladder cancer masses from images in the axial plane, the best results were achieved if pre-trained ResNet50 was used as a backbone, with a DSC up to 0.9372 and sigma(DSC) of 0.0147. Finally, in the case of images in the sagittal plane, the highest results were achieved with VGG-16 as a backbone. In this case, (DSC) over bar values up to 0.9660 with a sigma(DSC) of 0.0486 were achieved. From the listed results, the proposed semantic segmentation system worked with high performance both from the semantic segmentation and generalization standpoints. The presented results indicate that there is the possibility for the utilization of the semantic segmentation system in clinical practice.
引用
收藏
页数:25
相关论文
共 50 条
  • [31] A Semi-Supervised Learning Approach for Tissue Semantic Segmentation in Whole Slide Images
    Rashmi, R.
    Sudhamsh, G. V. S.
    Girisha, S.
    IEEE ACCESS, 2024, 12 : 120482 - 120497
  • [32] Blood Cell Images Segmentation using Deep Learning Semantic Segmentation
    Thanh Tran
    Kwon, Oh-Heum
    Kwon, Ki-Ryong
    Lee, Suk-Hwan
    Kang, Kyung-Won
    2018 IEEE INTERNATIONAL CONFERENCE ON ELECTRONICS AND COMMUNICATION ENGINEERING (ICECE 2018), 2018, : 13 - 16
  • [33] Two-Stage Approach for Semantic Image Segmentation of Breast Cancer : Deep Learning and Mass Detection in Mammographic images
    Touazi, Faycal
    Gaceb, Djamel
    Chirane, Marouane
    Herzallah, Selma
    6TH INTERNATIONAL CONFERENCE ON INFORMATICS & DATA-DRIVEN MEDICINE, IDDM 2023, 2023, 3609
  • [34] Bayesian deep learning for semantic segmentation of food images
    Aguilar, Eduardo
    Nagarajan, Bhalaji
    Remeseiro, Beatriz
    Radeva, Petia
    Computers and Electrical Engineering, 2022, 103
  • [35] Active Reinforcement Learning for the Semantic Segmentation of Urban Images
    Rad, Mahya Jodeiri
    Armenakis, Costas
    CANADIAN JOURNAL OF REMOTE SENSING, 2024, 50 (01)
  • [36] Bayesian deep learning for semantic segmentation of food images
    Aguilar, Eduardo
    Nagarajan, Bhalaji
    Remeseiro, Beatriz
    Radeva, Petia
    COMPUTERS & ELECTRICAL ENGINEERING, 2022, 103
  • [37] A Deep Learning Approach for Liver and Tumor Segmentation in CT Images Using ResUNet
    Rahman, Hameedur
    Bukht, Tanvir Fatima Naik
    Imran, Azhar
    Tariq, Junaid
    Tu, Shanshan
    Alzahrani, Abdulkareeem
    BIOENGINEERING-BASEL, 2022, 9 (08):
  • [38] ESS: Learning Event-Based Semantic Segmentation from Still Images
    Sun, Zhaoning
    Messikommer, Nico
    Gehrig, Daniel
    Scaramuzza, Davide
    COMPUTER VISION, ECCV 2022, PT XXXIV, 2022, 13694 : 341 - 357
  • [39] Semantic segmentation of slums in satellite images using transfer learning on fully convolutional neural networks
    Wurm, Michael
    Stark, Thomas
    Zhu, Xiao Xiang
    Weigand, Matthias
    Taubenboeck, Hannes
    ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING, 2019, 150 : 59 - 69
  • [40] Esophagus segmentation from planning CT images using an atlas-based deep learning approach
    Bandeira Diniz, Joao Otavio
    Ferreira, Jonnison Lima
    Bandeira Diniz, Pedro Henrique
    Silva, Aristofanes Correa
    de Paiva, Anselmo Cardoso
    COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2020, 197