Strict thermal threshold identified by quantitative PCR in the sponge Rhopaloeides odorabile

被引:25
|
作者
Pantile, Raffaella [1 ]
Webster, Nicole [1 ]
机构
[1] Australian Inst Marine Sci, Townsville, Qld 4810, Australia
关键词
qPCR; Quantitative PCR; Thermal stress; Porifera; Great Barrier Reef; POLYMERASE CHAIN-REACTION; HEAT-SHOCK-PROTEIN; HOUSEKEEPING GENE SELECTION; CLIMATE-CHANGE; RT-PCR; SUBERITES-DOMUNCULA; OXIDATIVE STRESS; EXPRESSION; QUANTIFICATION; NORMALIZATION;
D O I
10.3354/meps09128
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
In light of increasing sea surface temperatures, quantifying the expression of stress-inducible genes in coastal organisms is imperative to identify early biomarkers of thermal stress. In the present study we developed a quantitative PCR (qPCR) assay to test the molecular response to heat stress in the Great Barrier Reef sponge Rhopaloeides odorabile. Suitable reference genes (coding for a-tubulin, 28S rRNA and ubiquitin) were identified among 5 candidates and then used to normalise expression of target genes (actin-related protein, calmodulin, ferritin, ubiquitin-conjugating enzyme, heat shock protein 90 [Hsp90] and heat shock protein 40 [Hsp40]) in samples exposed to high temperatures (31 and 32 degrees C) for 1, 3, 14 and 15 d. A rapid down-regulation of most genes (actin-related protein, ferritin, calmodulin and Hsp90) was observed at both temperatures within 24 h, indicating an initial shut-down of the sponge's molecular systems in response to thermal stress. The increased expression of Hsp40 and Hsp90 in sponges at 32 degrees C after 1 and 3 d respectively indicates an activation of the heat shock response system and is consistent with their role as chaperones for directing degraded proteins to proteolysis, this last process being sustained by an induction of the ubiquitin-conjugating enzyme gene at this temperature. While sponges kept at 32 degrees C only survived for the first 3 d, none of the genes in sponges kept at 31 degrees C were significantly different from those in the 27 degrees C controls after 14 d. This indicates a very strict thermal threshold for R. odorabile between 31 and 32 degrees C and is consistent with previous findings based on sponge necrosis and symbiotic disruptions in this species.
引用
收藏
页码:97 / 105
页数:9
相关论文
共 50 条
  • [41] Cytokine Induced Gene Expression in Cardiomyocytes can be Identified by Quantitative RT-PCR Analysis in Multiple Samples from Myocarditis Hearts
    Hanawa, Haruo
    Hao, Kazuhisa
    Kodama, Makoto
    Aizawa, Yoshifusa
    JOURNAL OF CARDIAC FAILURE, 2010, 16 (09) : S155 - S155
  • [42] Thermal threshold testing - A quantitative method to detect early changes in small nerve fibres function in diabetes.
    Korzon-Burakowska, A
    Allawi, J
    Burakowski, S
    Przezdziak, M
    DIABETOLOGIA, 1998, 41 : A273 - A273
  • [43] Effect of thermal processing on the performance of the novel single-tube nested real-time PCR for the detection of walnut allergens in sponge cakes
    Costa, Joana
    Oliveira, Maria Beatriz P. P.
    Mafra, Isabel
    FOOD RESEARCH INTERNATIONAL, 2013, 54 (02) : 1722 - 1729
  • [44] Quantitative RT-PCR reveals a similar pattern of cytokine dysregulation in mycosis fungoides skin compared to those identified in a mouse model of CTCL
    Wu, X.
    Mackinnon, A. C.
    Hwang, S. T.
    JOURNAL OF INVESTIGATIVE DERMATOLOGY, 2012, 132 : S19 - S19
  • [45] Immune reactivity against a novel HLA-A3-restricted influenza virus peptide identified by predictive algorithms and interferon-γ quantitative PCR
    Trojan, A
    Urosevic, M
    Hummerjohann, J
    Giger, R
    Schanz, U
    Stahel, RA
    JOURNAL OF IMMUNOTHERAPY, 2003, 26 (01): : 41 - 46
  • [46] Application of Multiplex Bisulfite PCR-Ligase Detection Reaction-Real-Time Quantitative PCR Assay in Interrogating Bioinformatically Identified, Blood-Based Methylation Markers for Colorectal Cancer
    Bacolod, Manny D.
    Mirza, Aashiq H.
    Huang, Jianmin
    Giardina, Sarah F.
    Feinberg, Philip B.
    Soper, Steven A.
    Barany, Francis
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2020, 22 (07): : 885 - 900
  • [47] THERMAL PAIN THRESHOLD AND TOLERANCE MEASURED BY QUANTITATIVE SENSORY TESTING IN OVERACTIVE BLADDER (OAB): DO WOMEN WITH OAB DEMONSTRATE HYPERALGESIA?
    Brown, Elizabeth Timbrook
    Mock, Stephen
    Cohn, Joshua
    Kaufman, Melissa
    Bruehl, Stephen
    Dmochowski, Roger
    Reynolds, W. Stuart
    NEUROUROLOGY AND URODYNAMICS, 2016, 35 : S30 - S30
  • [48] Quantitative single-cell reverse transcription PCR demonstrates that A-current magnitude varies as a linear function of shal gene expression in identified stomatogastric neurons
    Baro, DJ
    Levini, RM
    Kim, MT
    Willms, AR
    Lanning, CC
    Rodriguez, HE
    HarrisWarrick, RM
    JOURNAL OF NEUROSCIENCE, 1997, 17 (17): : 6597 - 6610
  • [49] Thermal stress responses in Antarctic yeast, Glaciozyma antarctica PI12, characterized by real-time quantitative PCR
    Boo, Sook Yee
    Wong, Clemente Michael Vui Ling
    Rodrigues, Kenneth Francis
    Najimudin, Nazalan
    Murad, Abdul Munir Abdul
    Mahadi, Nor Muhammad
    POLAR BIOLOGY, 2013, 36 (03) : 381 - 389
  • [50] Thermal stress responses in Antarctic yeast, Glaciozyma antarctica PI12, characterized by real-time quantitative PCR
    Sook Yee Boo
    Clemente Michael Vui Ling Wong
    Kenneth Francis Rodrigues
    Nazalan Najimudin
    Abdul Munir Abdul Murad
    Nor Muhammad Mahadi
    Polar Biology, 2013, 36 : 381 - 389