Statistical considerations for cross-sectional HIV incidence estimation based on recency test
被引:5
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作者:
Gao, Fei
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Fred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, 1100 Fairview Ave N M2-C200, Seattle, WA 98109 USA
Fred Hutchinson Canc Res Ctr, Publ Hlth Sci Div, Seattle, WA 98109 USAFred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, 1100 Fairview Ave N M2-C200, Seattle, WA 98109 USA
Gao, Fei
[1
,2
]
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Bannick, Marlena
[3
]
机构:
[1] Fred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, 1100 Fairview Ave N M2-C200, Seattle, WA 98109 USA
[2] Fred Hutchinson Canc Res Ctr, Publ Hlth Sci Div, Seattle, WA 98109 USA
[3] Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Longitudinal cohorts to determine the incidence of HIV infection are logistically challenging, so researchers have sought alternative strategies. Recency test methods use biomarker profiles of HIV-infected subjects in a cross-sectional sample to infer whether they are "recently" infected and to estimate incidence in the population. Two main estimators have been used in practice: one that assumes a recency test is perfectly specific, and another that allows for false-recent results. To date, these commonly used estimators have not been rigorously studied with respect to their assumptions and statistical properties. In this article, we present a theoretical framework with which to understand these estimators and interrogate their assumptions, and perform a simulation study and data analysis to assess the performance of these estimators under realistic HIV epidemiological dynamics. We find that the snapshot estimator and the adjusted estimator perform well when their corresponding assumptions hold. When assumptions on constant incidence and recency test characteristics fail to hold, the adjusted estimator is more robust than the snapshot estimator. We conclude with recommendations for the use of these estimators in practice and a discussion of future methodological developments to improve HIV incidence estimation via recency test.
机构:
Univ Calif Los Angeles, Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90024 USAUniv Calif Los Angeles, Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90024 USA
Brookmeyer, Ron
Laeyendecker, Oliver
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机构:
NIAID, Lab Immunoregulat, NIH, Baltimore, MD USA
Johns Hopkins Univ, Sch Med, Dept Med, Baltimore, MD 21205 USAUniv Calif Los Angeles, Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90024 USA
Laeyendecker, Oliver
Donnell, Deborah
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Fred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, Seattle, WA 98104 USAUniv Calif Los Angeles, Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90024 USA
Donnell, Deborah
Eshleman, Susan H.
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Johns Hopkins Univ, Sch Med, Dept Pathol, Baltimore, MD 21205 USAUniv Calif Los Angeles, Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90024 USA
机构:
Univ Calif Los Angeles, Fielding Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Fielding Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90095 USA
Morrison, Doug
Laeyendecker, Oliver
论文数: 0引用数: 0
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机构:
NIAID, Lab Immunoregulat, NIH, Baltimore, MD USA
Johns Hopkins Univ, Sch Med, Dept Med, Div Infect Dis, Baltimore, MD 21205 USAUniv Calif Los Angeles, Fielding Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90095 USA
Laeyendecker, Oliver
Brookmeyer, Ron
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Fielding Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Fielding Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90095 USA
机构:
Fred Hutchinson Canc Res Ctr, Biostat Bioinformat & Epidemiol Program, Seattle, WA 98109 USA
Fred Hutchinson Canc Ctr, Publ Hlth Sci Div, Seattle, WA USAUniv Washington, Dept Biostat, Seattle, WA USA
Donnell, Deborah
Hayes, Richard
论文数: 0引用数: 0
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机构:
London Sch Hyg & Trop Med, Dept Infect Dis Epidemiol, London, EnglandUniv Washington, Dept Biostat, Seattle, WA USA
Hayes, Richard
Laeyendecker, Oliver
论文数: 0引用数: 0
h-index: 0
机构:
Johns Hopkins Univ, Sch Med, Baltimore, MD USA
NIAID, Div Intramural Res, Bethesda, MD USAUniv Washington, Dept Biostat, Seattle, WA USA
Laeyendecker, Oliver
Gao, Fei
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机构:
Fred Hutchinson Canc Res Ctr, Biostat Bioinformat & Epidemiol Program, Seattle, WA 98109 USA
Fred Hutchinson Canc Ctr, Publ Hlth Sci Div, Seattle, WA USAUniv Washington, Dept Biostat, Seattle, WA USA
机构:
Family Hlth Int, Clin Sci, Durham, NC USANIAID, NIH, Bethesda, MD 20892 USA
Morrison, Charles S.
Salata, Robert A.
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机构:
Case Western Reserve Univ, Div Infect Dis & HIV Med, Cleveland, OH 44106 USA
Univ Hosp Cleveland, Case Med Ctr, Cleveland, OH 44106 USANIAID, NIH, Bethesda, MD 20892 USA
Salata, Robert A.
Chipato, Tsungai
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Univ Zimbabwe, Harare, ZimbabweNIAID, NIH, Bethesda, MD 20892 USA
Chipato, Tsungai
Celum, Connie
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机构:
Univ Washington, Dept Global Hlth Med & Epidemiol, Seattle, WA 98195 USANIAID, NIH, Bethesda, MD 20892 USA
Celum, Connie
Kahle, Erin M.
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机构:
Univ Washington, Dept Epidemiol, Seattle, WA 98195 USANIAID, NIH, Bethesda, MD 20892 USA
机构:
Columbia Univ, Dept Epidemiol, Mailman Sch Publ Hlth, New York, NY USANIAID, NIH, Bethesda, MD 20892 USA
Karim, Quarraisha Abdool
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Naranbhai, Vivek
Lingappa, Jairam R.
论文数: 0引用数: 0
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机构:
Univ Washington, Dept Global Hlth, Seattle, WA 98195 USA
Univ Washington, Dept Med & Pediat, Seattle, WA 98195 USANIAID, NIH, Bethesda, MD 20892 USA
Lingappa, Jairam R.
Sweat, Michael D.
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机构:
Med Univ S Carolina, Dept Psychiat & Behav Sci, Charleston, SC 29425 USANIAID, NIH, Bethesda, MD 20892 USA
Sweat, Michael D.
Coates, Thomas
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机构:
Univ Calif Los Angeles, UCLA Program Global Hlth, Los Angeles, CA USANIAID, NIH, Bethesda, MD 20892 USA