A pan-cancer analysis of the oncogenic role of ribonucleotide reductase subunit M2 in human tumors

被引:4
|
作者
Li, Yaqun [1 ]
Fu, Wenhuan [1 ]
Geng, Zikai [2 ]
Song, Yun [1 ]
Yang, Xionggang [3 ]
He, Tianye [1 ]
Wu, Jian [1 ]
Wang, Bin [1 ]
机构
[1] Fudan Univ, Huashan Hosp, Dept Pharm, Shanghai, Peoples R China
[2] Binzhou Med Univ, Pharm Sch, Shandong, Peoples R China
[3] Fudan Univ, Huashan Hosp, Dept Orthoped Surg, Shanghai, Peoples R China
来源
PEERJ | 2022年 / 10卷
基金
中国国家自然科学基金;
关键词
RRM2; Pan-cancer; Immune infiltration; Prognosis; Tumor microenvironment; Hepatitis B; IMMUNE CHECKPOINT INHIBITORS; REGULATORY T-CELLS; HEPATOCELLULAR-CARCINOMA; GENE; EXPRESSION; PROGNOSIS; SIGNATURE; BIOMARKER;
D O I
10.7717/peerj.14432
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background. Recent studies have identified ribonucleotide reductase subunit M2 (RRM2) as a putative promoter of tumors. However, no systematic analysis of its carcinogenicity has been conducted. Methods. The potential functions of RRM2 in various tumor types were investigated using data from the Genotype-Tissue Expression (GTEx), the Clinical Proteomic Tumor Analysis Consortium (CPTAC), the Cancer Genome Atlas (TCGA), the Human Protein Atlas (HPA), cBioPortal, GEPIA, String, and Gene Set Enrichment Analysis (GSEA). We analyzed the difference in mRNA and protein expression, pathological stage, survival, mutation, tumor microenvironment (TME), and immune cell infiltration in relation to RRM2. Meanwhile, using TCGA and the Tumor Immune Estimation Resource 2 (TIMER 2), the associations between RRM2 expression, immune infiltration, and immune-related genes were assessed. Additionally, CCK-8, Edu and RT-PCR assays were used to validate that RRM2 acts as an oncogene in liver cancer cells and its association with HBx. A cohort of liver hepatocellular carcinoma (LIHC) patients (n=154) from Huashan Hospital was analyzed for the expression of RRM2 and the association between RRM2 and immune infiltration.Results. Using the GTEx and TCGA databases, we discovered that 28 tumors expressed RRM2 at significantly higher levels than the corresponding normal tissues. Increased RRM2 expression may be predictive of a poor overall survival (OS) in patients with seven different cancers. GO, KEGG, and GSEA analyses revealed that the biological process of RRM2 was associated with the regulation of carcinogenic processes and immune pathways in a variety of tumor types. The expression of RRM2 was highly correlated with maker genes involved in immune activation and immunosuppression, immune checkpoints, DNA mismatch repair system (MMR), and the infiltration levels of Tregs and macrophages (TAMs), suggesting that the carcinogenic effect of RRM2 may be achieved by regulating immune related genes. Moreover, as demonstrated by CCK-8 and Edu assays, RRM2 was an oncogene in liver cancer cells. We confirmed for the first time that RRM2 was significantly upregulated by HBx, suggesting that RRM2 may be a key regulator of LIHC induced by HBV. IHC analysis validated the upregulated expression of RRM2 protein and its correlation with immune infiltration makers in a LIHC patient cohort.Conclusion. RRM2 may be a valuable molecular biomarker for predicting prognosis and immunotherapeutic efficacy in pan-cancer, particularly in LIHC.
引用
收藏
页数:29
相关论文
共 50 条
  • [31] Role of ribonucleotide reductase subunit M2 in regulation of head and neck and lung cancer undergoing invasion.
    Rahman, Mohammad Aminur
    Amin, A. R. M. R.
    Nannapaneni, Sreenivas
    Hu, Zhongliang
    Kang, Hyunseok
    Chen, Zhuo
    Shin, Dong M.
    CANCER RESEARCH, 2013, 73 (08)
  • [32] A Pan-Cancer Analysis of the Oncogenic Role of WD Repeat Domain 74 in Multiple Tumors
    Wu, Xiaoxuan
    Song, Peng
    Wang, Shun
    Qian, Zhirong
    Ying, Jianming
    Gao, Shugeng
    Li, Wenbin
    FRONTIERS IN GENETICS, 2022, 13
  • [33] A pan-cancer analysis of the oncogenic role of zinc finger protein 419 in human cancer
    Zhu, Weizhen
    Feng, Dechao
    Shi, Xu
    Li, Dengxiong
    Wei, Qiang
    Yang, Lu
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [34] Comprehensive bioinformatics analysis of ribonucleoside diphosphate reductase subunit M2(RRM2) gene correlates with prognosis and tumor immunotherapy in pan-cancer
    Wu, Liyuan
    Yin, Le
    Ma, Linxiang
    Yang, Jiarui
    Yang, Feiya
    Sun, Baofa
    Xing Nianzeng
    AGING-US, 2022, 14 (19): : 7890 - 7905
  • [35] A Pan-Cancer Analysis of the Oncogenic Role of Integrin Beta4 (ITGB4) in Human Tumors
    Huang, Wenjie
    Fan, Li
    Tang, Yongmei
    Chi, Yinxiu
    Li, Jingjing
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2021, 14 : 9629 - 9645
  • [36] Characterization of the human ribonucleotide reductase M2 subunit gene; genomic structure and promoter analyses
    Zhou, B
    Yen, Y
    CYTOGENETICS AND CELL GENETICS, 2001, 95 (1-2): : 52 - 59
  • [37] Prognostic and therapeutic significance of ribonucleotide reductase small subunit M2 in prostate cancer.
    Mazzu, Ying Zhang
    Gerke, Travis A.
    Chakraborty, Goutam
    Armenia, Joshua
    Atiq, Mohammad Omar
    Komura, Kazumasa
    Yoshikawa, Yuki
    Lee, Gwo-Shu Mary
    Mucci, Lorelei A.
    Kantoff, Philip W.
    JOURNAL OF CLINICAL ONCOLOGY, 2018, 36 (06)
  • [38] A pan-cancer analysis of the prognostic implication and oncogenic role of tubulin epsilon and delta complex 2 (TEDC2) in human tumors
    Liu, Yang
    Zhu, Jie
    Shen, Jing
    Lu, Yuting
    Pan, Ke
    Tong, Chuan
    Wang, Yao
    FRONTIERS IN IMMUNOLOGY, 2024, 14
  • [39] A pan-cancer analysis of the role of hexokinase II (HK2) in human tumors
    Ruiqi Li
    Shuchong Mei
    Qiang Ding
    Qingming Wang
    Li Yu
    Fuming Zi
    Scientific Reports, 12
  • [40] A pan-cancer analysis of the role of argininosuccinate synthase 1 in human tumors
    Ding, Qiang
    Li, Ruiqi
    Wang, Qingming
    Yu, Li
    Zi, Fuming
    FRONTIERS IN ONCOLOGY, 2023, 13