Computational measurement of tumor immune microenvironment in gastric adenocarcinomas

被引:11
|
作者
Chang, Young Hwan [1 ,2 ]
Heo, You Jeong [3 ]
Cho, Junhun [4 ]
Song, Sang Yong [4 ]
Lee, Jeeyun [5 ]
Kim, Kyoung-Mee [4 ]
机构
[1] Oregon Hlth & Sci Univ, Dept Biomed Engn, Portland, OR 97239 USA
[2] Oregon Hlth & Sci Univ, Computat Biol Program, Portland, OR 97239 USA
[3] Sungkyunkwan Univ, SAIHST, Samsung Med Ctr, Sch Med, Seoul, South Korea
[4] Sungkyunkwan Univ, Dept Pathol & Translat Genom, Samsung Med Ctr, Sch Med, Seoul, South Korea
[5] Sungkyunkwan Univ, Div Hematol Oncol, Dept Med, Samsung Med Ctr,Sch Med, Seoul, South Korea
来源
SCIENTIFIC REPORTS | 2018年 / 8卷
关键词
IMAGE-ANALYSIS; EXPRESSION; PD-L1;
D O I
10.1038/s41598-018-32299-0
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The use of four groups of tumor immune microenvironments (TME) based on PD-L1 and tumor-infiltrating T lymphocytes (TIL) is a reliable biomarker for anti-PD-1/PD-L1 inhibitor therapy. We classified the TME in 241 gastric cancers which were subdivided according to 40 EBV+, 76 microsatellite instability-high (MSI-H), and 125 EBV-/microsatellite-stable (MSS) subtypes by quantitative image analysis (QIA) and correlated the results with mRNA expression levels. The mean PD-L1 ratio and CD8 ratio in EBV+, MSI-H, and EBV-/MSS GCs were significantly different (P < 0.006). The PD-L1 ratio and CD8 ratio obtained by QIA correlated well with the RNA levels of PD-L1 (r = 0.63) and CD8 (r = 0.67), respectively. The TME were type I (PD-L1(H)/CD8(H)) in 45, type II (PD-L1(L)/CD8(L)) in 106, type III (PD-L1(H)/CD8(L)) in 8, and type IV (PD-L1(L)/CD8(H)) in 82 cases. The type I TME was significantly associated with high TIL (P = 3.0E-11) and EBV+status (P = 8.55E-08). In conclusion, QIA results correlated well with the mRNA expression levels and classified TME of gastric cancers.
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页数:8
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