Arthrobacter silvisoli sp. nov., isolated from forest soil

被引:13
|
作者
Yan, Rui [1 ]
Fu, Yansong [1 ]
Liu, Dongli [1 ]
Jiang, Shanwen [1 ]
Ju, Hanxun [1 ]
Guo, Xiaokui [1 ]
Guo, Xiaowei [1 ]
Wang, Xiangjing [1 ]
Zhang, Ji [1 ]
Xiang, Wensheng [1 ,2 ]
机构
[1] Northeast Agr Univ, Sch Life Sci, Harbin 150030, Heilongjiang, Peoples R China
[2] Chinese Acad Agr Sci, Inst Plant Protect, State Key Lab Biol Plant Dis & Insect Pests, Beijing 100193, Peoples R China
基金
国家重点研发计划; 中国国家自然科学基金;
关键词
Arthrobacter silvisoli; draft genome; ANI; in silico DNA-DNA hybridization; GEN; NOV; EMENDED DESCRIPTION; RECLASSIFICATION; RHIZOSPHERE; EMENDATION; SEQUENCES; TAXONOMY;
D O I
10.1099/ijsem.0.003085
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel Gram-stain-positive, strictly aerobic strain, NEAU-SA1(T), which showed a rod-coccus growth life cycle, was isolated from forest soil from Zhangjiajie, Hunan Province, China. The isolate grew at 10-40 degrees C (optimum 28 degrees C), at pH 5.0-10.0 (optimum pH 7.0) and in the presence of up to 5 % (w/v) NaCl, although NaCl was not required for growth. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NEAU-SA1(T) belonged to the genus Arthrobacter and was closely related to Arthrobacter cupressi DSM 24664(T) (98.1 % similarity). Average nucleotide identity values between NEAUSA1(T) and A. cupressi DSM 24664(T) were 88.91 and 87.41 % by ANIm and ANIb analysis, respectively. The in silico DNA-DNA hybridization value between strain NEAU-SA1(T) and A. cupressi DSM 24664 T was 34.20 %, again indicating they belong to different taxa. The genomic DNA G+C content was 66.74 mol%. The major cellular fatty acids (>10 %) were anteiso-C-15(:0), anteiso C-17(:0) and iso-C-16:0. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and two unidentified glycolipids. The predominant menaquinone was MK-9(H-2). The peptidoglycan type was A3 alpha with an interpeptide bridge comprising L-Lys and L-Ala. Glucose, ribose and galactose were the whole-cell sugars. On the basis of morphological, physiological, biochemical and chemotaxonomic analysis, strain NEAU-SA1(T) was classified as representing a novel species in the genus Arthrobacter, for which the name Arthrobacter silvisoli sp. nov. is proposed. The type strain is NEAU-SA1(T) (=DSM 106716(T) =CCTCC AB 2017271(T) ).
引用
收藏
页码:3892 / 3896
页数:5
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