A classification study of human β3-adrenergic receptor agonists using BCUT descriptors

被引:10
|
作者
Hao, Ming [1 ]
Li, Yan [1 ]
Wang, Yonghua [2 ]
Zhang, Shuwei [1 ]
机构
[1] Dalian Univ Technol, Dept Mat Sci & Chem Engn, Dalian 116024, Liaoning, Peoples R China
[2] NW A&F Univ, Ctr Bioinformat, Yangling 71210, Shaanxi, Peoples R China
基金
中国国家自然科学基金;
关键词
Human beta(3)-adrenergic receptor agonists; Variable selection; Dragon descriptors; Random forest; BENZOIC-ACID DERIVATIVES; GOOD ORAL BIOAVAILABILITY; HIGHLY POTENT; OVERACTIVE BLADDER; RANDOM FOREST; DISCOVERY; QSAR; PREDICTION; BIPHENYL; SERIES;
D O I
10.1007/s11030-011-9321-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Experimental EC(50)s for 202 human beta(3)-AR agonists are used to develop classification models as a potential screening tool for a large library of target compounds before synthesis. A variable selection approach from random forests (VS-RF) is used to extract the structural information most relevant to the human beta(3)-AR activation properties of the collected data set. The obtained results indicate that the VS-RF method can be used for variable selection with smallest sets of non-redundant descriptors with highly predictive accuracy (Q(ex)%=96% for the external prediction set). Thus, the proposed VS-RF models should be helpful for screening of potential human beta(3)-AR agonists before chemical synthesis in drug development.
引用
收藏
页码:877 / 887
页数:11
相关论文
共 50 条
  • [31] Molecular cloning of the porcine β3-adrenergic receptor
    Smith, TR
    Bidwell, CA
    Mills, SE
    FASEB JOURNAL, 2000, 14 (04): : A479 - A479
  • [32] Three-dimensional QSAR and pharmacophore mapping of biphenyl benzoic acid derivatives as selective human β3-adrenergic receptor agonists
    Vikas N. Telvekar
    Dharmeshkumar J. Patel
    Nikhil C. Jadhav
    Sanket J. Mishra
    Medicinal Chemistry Research, 2010, 19 : 1174 - 1190
  • [33] Three-dimensional QSAR and pharmacophore mapping of biphenyl benzoic acid derivatives as selective human β3-adrenergic receptor agonists
    Telvekar, Vikas N.
    Patel, Dharmeshkumar J.
    Jadhav, Nikhil C.
    Mishra, Sanket J.
    MEDICINAL CHEMISTRY RESEARCH, 2010, 19 (09) : 1174 - 1190
  • [34] Quantitative structure-activity studies of imidazolidinone benzene sulfonamides :: human β3-adrenergic receptor agonists acting as antiobesity drugs
    Kashaw, SK
    Mishra, P
    JOURNAL OF THE INDIAN CHEMICAL SOCIETY, 2003, 80 (09) : 858 - 860
  • [35] QSAR STUDY OF ADENOSINE ANALOGUES AS AGONISTS OF THE HUMAN A3 ADENOSINE RECEPTOR USING 3D MOLECULAR DESCRIPTORS
    Perez-Castillo, Yunierkis
    Teijeira, Marta
    Besada, Pedro
    Teran, Carmen
    DRUGS OF THE FUTURE, 2009, 34 : 174 - 174
  • [36] Potent, selective aminothiazolidinediones agonists of the human β3 adrenergic receptor
    Malamas, MS
    Largis, E
    Gunawan, I
    Li, ZN
    Tillett, J
    Han, SCH
    Mulvey, R
    MEDICINAL CHEMISTRY RESEARCH, 2000, 10 (03) : 164 - 177
  • [37] Discovery of benzamides as potent human β3 adrenergic receptor agonists
    Zhu, Cheng
    Kar, Nam F.
    Li, Bing
    Costa, Melissa
    Dingley, Karen H.
    Di Salvo, Jerry
    Ha, Sookhee N.
    Hurley, Amanda L.
    Li, Xiaofang
    Miller, Randy R.
    Salituro, Gino M.
    Struthers, Mary
    Weber, Ann E.
    Hale, Jeffrey J.
    Edmondson, Scott D.
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2016, 26 (01) : 55 - 59
  • [38] Pharmacological characterization of a recently described human beta 3-adrenergic receptor mutant
    Candelore, MR
    Deng, LP
    Tota, LM
    Kelly, LJ
    Cascieri, MA
    Strader, CD
    ENDOCRINOLOGY, 1996, 137 (06) : 2638 - 2641
  • [39] Potent, selective benzenesulfonamide agonists of the human β3 adrenergic receptor
    Weber, AE
    Mathvink, RJ
    Perkins, L
    Hutchins, JE
    Candelore, MR
    Tota, L
    Strader, CD
    Wyvratt, MJ
    Fisher, MH
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 1998, 8 (09) : 1101 - 1106
  • [40] Human β3 adrenergic receptor agonists containing cyclic ureidobenzenesulfonamides
    Parmee, ER
    Naylor, EM
    Perkins, L
    Colandrea, VJ
    Ok, HO
    Candelore, MR
    Cascieri, MA
    Deng, LP
    Feeney, WP
    Forrest, MJ
    Hom, GJ
    MacIntyre, DE
    Miller, RR
    Stearns, RA
    Strader, CD
    Tota, L
    Wyvratt, MJ
    Fisher, MH
    Weber, AE
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 1999, 9 (05) : 749 - 754