Synthesis, Structural Characterization, X-ray, Hirshfeld Surfaces, DFT calculations, In Silico ADME Approach and a Molecular Docking Study of a New Nickel(II) Complex

被引:1
|
作者
Carvalho Souza, Rafael Aparecido [1 ]
Cunha, Vito Labruna [1 ]
Franca, Eduardo de Faria [1 ]
Deflon, Victor Marcelo [2 ]
Maia, Pedro I. S. [3 ]
Oliveira, Carolina Goncalves [1 ]
机构
[1] Univ Fed Uberlandia, Inst Chem, BR-38400902 Uberlandia, MG, Brazil
[2] Univ Sao Paulo, Sao Carlos Inst Chem, BR-13560970 Sao Carlos, Brazil
[3] Univ Fed Triangulo Mineiro, Dept Chem, BR-38025440 Uberaba, MG, Brazil
来源
CHEMISTRYSELECT | 2022年 / 7卷 / 37期
基金
巴西圣保罗研究基金会;
关键词
Hirshfeld surfaces; in silico ADME; Molecular docking study; Nickel; Thiosemicarbazones; X-ray crystallographic analysis; DRUG DISCOVERY; PT-II; PD-II; THIOSEMICARBAZONES; CYTOTOXICITY; SOLUBILITY; PREDICTION; MECHANISM;
D O I
10.1002/slct.202202409
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
In this study, synthesis, characterization, DFT and evaluation of the theoretical antibacterial activity through molecular docking of two different Nickel(II) complexes based on 2-acetylpyridine-N(4)-R-thiosemicarbazone are described. The ligand where R=ethyl is named L-1 and its complex [Ni-II(L-1)(2)] (Complex 1) while, for the second complex, R is phenyl (L-2) resulting in a novel [Ni-II(L-2)(2)] complex (Complex 2). The compounds were characterized by infrared and ultraviolet spectroscopy and elemental analysis. The molecular structure of 1 was determined by single-crystal X-ray diffraction. The complex crystallizes in monoclinic crystal system, adopting a distorted octahedral geometry and the crystal lattice is stabilized by H center dot center dot center dot H, C center dot center dot center dot H/H center dot center dot center dot C, N center dot center dot center dot H/H center dot center dot center dot N and S center dot center dot center dot H/H center dot center dot center dot S interactions (Hirshfeld Surfaces). The results of density functional theory provided information about molecular structures, molecular frontier orbital and theorical IR and the UV-Vis spectra of 1 and 2. The molecular docking and in silico analysis of pharmacokinetic parameters of the compounds showed promising results.
引用
收藏
页数:14
相关论文
共 50 条
  • [31] Experimental and theoretical investigations for novel 6-nitroquinoxaline-2,3-dione derivatives: Synthesis, characterization, DFT calculations, ADME analysis, hirshfeld surface calculations, molecular docking studies, and antiproliferation evaluation
    Seqqat, Yousra
    El Monfalouti, Hanae
    Anouar, El Hassane
    Laaraj, Soukaina
    Mague, Joel T.
    Chahdi, Fouad Ouazzani
    Rodi, Youssef Kandri
    Essassi, El Mokhtar
    Sebbar, Nada Kheira
    JOURNAL OF MOLECULAR STRUCTURE, 2025, 1319
  • [32] Tricarbonyl rhenium(I) complex of benzothiazole - Synthesis, spectroscopic characterization, X-ray crystal structure and DFT calculations
    Machura, B.
    Wolff, M.
    Benoist, E.
    Coulais, Y.
    JOURNAL OF ORGANOMETALLIC CHEMISTRY, 2013, 724 : 82 - 87
  • [33] Nitrite-bonded nickel(II) complex of N-cyclohexyl-N-(2-pyridinylmethyl)amine; Synthesis, spectroscopic characterization, X-ray structure and DFT calculations
    Golchoubian, Hamid
    Kocheksaraee, Shahnaz Khosravi
    Moayyedi, Golasa
    POLYHEDRON, 2017, 123 : 376 - 384
  • [35] Synthesis, spectroscopy, X-ray crystallography, DFT calculations, DNA binding and molecular docking of a propargyl arms containing Schiff base
    Balakrishnan, C.
    Subha, L.
    Neelakantan, M. A.
    Mariappan, S. S.
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2015, 150 : 671 - 681
  • [36] X-Ray Structure, DFT Study ofp-Chlorobenzoic Acid, and the Effect of In Silico Molecular Docking on Tankyrase I Enzyme
    El Sayed, Doaa S.
    Foro, Sabine
    RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY, 2020, 46 (04) : 542 - 550
  • [37] Synthesis, structural interpretation, DFT, molecular docking, antimicrobial assessment and cytotoxic profiling of a cadmium(II) hydroxamate complex: in vitro and in silico investigations
    Sharma, Shubham
    Thakur, Maridula
    Kumari, Meena
    JOURNAL OF COORDINATION CHEMISTRY, 2024, 77 (12-14) : 1645 - 1666
  • [38] Synthesis, X-ray crystallography, antimicrobial, molecular docking, and DFT study of bis-triazoles linked ampyrone
    Lal, Bajrang
    Tittal, Ram Kumar
    Mathpati, Ramling S.
    Vikas, D. Ghule
    Nehra, Nidhi
    Lal, Kashmiri
    JOURNAL OF MOLECULAR STRUCTURE, 2023, 1294
  • [39] X-ray characterization, Hirshfeld surface analysis, DFT calculations, in vitro and in silico lipoxygenase inhibition (LOX) studies of dichlorophenyl substituted 3-hydroxy-chromenones
    Ahmed, Muhammad Naeem
    Ghias, Mehreen
    Shah, Syed Wadood Ali
    Shoaib, Mohammad
    Tahir, Muhammad Nawaz
    Ashfaq, Muhammad
    Ibrahim, Mahmoud A. A.
    Andleeb, Hina
    Gil, Diego M.
    Frontera, Antonio
    NEW JOURNAL OF CHEMISTRY, 2021, 45 (42) : 19928 - 19940
  • [40] Efficient synthesis and antitumor activity of novel oxazaphosphinane derivatives: X-ray crystallography, DFT study and molecular docking
    Bahadi, Rania
    Berredjem, Malika
    Belhani, Billel
    Djouad, Seif-Eddine
    Bouacida, Sofiane
    Ouk, Tan Sothea
    Laichi, Yacine
    Bachari, Khaldoun
    Redjemia, Rayenne
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2023, 41 (10): : 4711 - 4722