The complete chloroplast genome of Myricaria laxiflora (Tamaricaceae): an endemic and endangered species from China

被引：5
|
作者：
Wang, Qian [1 ]
Zhang, Shu-Dong [2 ]
Ding, Bo [3 ]
Zhu, Xi [3 ]
Deng, Hong-Ping [1 ,4 ]
机构：
[1] Southwest Univ, Sch Life Sci, Inst Resources Bot, Chongqing Key Lab Plant Resource Conservat & Germ, Chongqing, Peoples R China
[2] Liupanshui Normal Univ, Sch Biol Sci & Technol, Liupanshui, Guizhou, Peoples R China
[3] Southwest Univ, Biotechnol Res Ctr, Chongqing, Peoples R China
[4] Chongqing Acad Sci & Technol, Chongqing Res Ctr Low Carbon & Ecol Environm, Chongqing, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期
关键词：
Chloroplast genome; Myricaria laxiflora; phylogenetic analysis; Tamaricaceae;
D O I：
10.1080/23802359.2020.1730266
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Myricaria laxiflora (Tamaricaceae) is an endangered species distributed only along the river beach of Yangtze River. Here, the complete chloroplast (cp) genome of M. laxiflora was assembled and characterized. The cp genome is in a total length of 154,971 bp with the typical quadripartite structure of angiosperms, containing 2 inverted repeats (IRs) of 26,004 bp separated by a large single-copy (LSC) region of 84,702 bp and a small single-copy (SSC) region of 18,261 bp. The whole cp genome of M. laxiflora contains 130 genes, including 85 protein-coding genes, 37 tRNAs genes, and 8 rRNAs. Phylogenetic analysis based on the complete cp genomes within the Tamaricaceae family suggests that M. laxiflora is closer to M. paniculata.
引用
收藏
页码：1153 / 1154
页数：2
相关论文
共 50 条
  • [41] Allozyme variation of the endangered endemic plant Myricaria laxiflora Implications for conservation
    Liu, Yifei
    Wang, Yong
    Liu, Songbai
    Huang, Hongwen
    BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 2010, 38 (04) : 463 - 470
  • [42] The complete chloroplast genome sequence of Annamocarya sinensis (Juglandaceae), an Endangered species endemic to Yunnan Province, China
    Ji, Yuman
    Zhang, Wanjie
    Li, Dan
    Shen, Lixin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2021 - 2023
  • [43] The complete chloroplast genome of Keteleeria davidiana var. calcarea (Pinaceae), an endangered species endemic to China
    Li, Jingjian
    Cheng, Niya
    Shi, Yancai
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 693 - 695
  • [44] The complete chloroplast genome of Vaccinium duclouxii, an endemic species in China
    Chen, Xin
    Liu, Qingzhong
    Guo, Wei
    Wei, Hairong
    Wang, Jiawei
    Zhu, Dongzi
    Tan, Yue
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2215 - 2216
  • [45] The complete chloroplast genome of Primula helodoxa, a species endemic to China
    Zhang, Li
    Chen, Xiong
    Huang, Yuan
    Wu, Zhikun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 194 - 195
  • [46] Correction to: Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China
    Ji‑Dong Ya
    Zhi‑Xiang Yu
    Yong-Qiong Yang
    Shu‑Dong Zhang
    Zhi‑Rong Zhang
    Jie Cai
    Jun‑Bo Yang
    Wen‑Bin Yu
    Conservation Genetics Resources, 2018, 10 : 915 - 915
  • [47] Characterization of the complete chloroplast genome of Davidia involucrata Baill. (Nysssaceae), an endangered species endemic to China
    Qi, Zhuo
    Jiang, Zhenzhong
    Jiao, Peng
    Qu, Jing
    Liu, Siyan
    Yao, Dan
    Wang, Piwu
    Guan, Shuyan
    Ma, Yiyong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 216 - 217
  • [48] The complete chloroplast genome of Madhuca hainanensis (Sapotaceae), an endemic and endangered timber species in Hainan Island, China
    Wang, Yong
    Wang, Hai-Tao
    Chen, Yu-Kai
    Yu, Jing
    Yang, Yong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 755 - 757
  • [49] Complete chloroplast genome sequence of Stephania kwangsiensis (Menispermaceae), a rare and critically endangered species endemic to China
    Shi, Yancai
    Liu, Bingbing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 188 - 189
  • [50] The complete chloroplast genome sequence of Poncirus polyandra (Rutaceae), an endangered species endemic to Yunnan Province, China
    Li, Siqi
    Zong, Dan
    Zhou, Anpei
    He, Chengzhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 766 - 768
12345