Distribution of HLA-A, -B and-DRB1 antigenic groups and haplotypes from the Brazilian bone marrow donor registry (REDOME)

被引:13
|
作者
Torres, Leandro [1 ,5 ]
da Silva Bouza, Luis Fernando [1 ,2 ,5 ]
Almada, Alexandre [1 ,5 ]
de Sobrino Porto, Luis Cristovao Moraes [4 ,5 ]
Abdelhay, Eliana [2 ,3 ]
机构
[1] INCA, Inst Nacl Canc, Registro Brasileiro Doadores Voluntarios Medula O, Rio De Janeiro, Brazil
[2] INCA, Inst Nacl Canc, Ctr Transplante Medula Ossea, Rio De Janeiro, Brazil
[3] INCA, Inst Nacl Canc, Lab Imunogenet, Rio De Janeiro, Brazil
[4] Univ Estado Rio De Janeiro, Lab Histocompatibilidade & Criopreservacao, Rio De Janeiro, Brazil
[5] Rede Brasil Imunogenet, Rio De Janeiro, Brazil
关键词
Haplotype frequency estimation; HLA haplotypes; Donor registry; Expectation-maximization; Human leukocyte antigen; Bone marrow transplant; GRANDE-DO-SUL; CLASS-I; POPULATION STRATIFICATION; FREQUENCY ESTIMATION; GENETIC ASSOCIATION; GENOMIC ANCESTRY; VOLUNTEER DONORS; CONTINENTS; ALLELES; DIVERSITY;
D O I
10.1016/j.humimm.2017.08.002
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
To improve assistance for patients awaiting a bone marrow transplant from an unrelated donor, it is important to genetically characterize the Brazilian volunteer bone marrow donors registry (REDOME). Our objective was to describe the antigenic groups and haplotype frequencies of HLA-A, HLA-B and HLA-DRB1 in the five regions of Brazil and by self-reported ethnicity groups using the REDOME data. Our study included 3,038,286 individuals. HLA antigenic groups and haplotype frequencies were estimated using an Expectation-Maximization (EM) algorithm. All described HLA-A*, HLA-B* and HLADRB1* groups were identified in this study. A*02 (25.9%), B*35 (11.8%) and DRB1*13 (13.4%) are the most frequent antigenic groups in REDOME, and the A*01-B*08-DRB1*03 haplotype is the most frequent in the registry. The antigenic group and haplotype frequency data obtained in this study could be helpful for national donor recruitment strategies across the country. (C) 2017 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.
引用
收藏
页码:602 / 609
页数:8
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