Molecular phylogenetics from an algebraic viewpoint

被引:0
|
作者
Allman, Elizabeth S. [1 ]
Rhodes, John A. [1 ]
机构
[1] Univ Alaska Fairbanks, Dept Math & Stat, Fairbanks, AK 99775 USA
关键词
markov models on trees; molecular evolution; phylogenetic invariants; phylogenetics; MAXIMUM-LIKELIHOOD; INVARIANTS; MODELS; PERFORMANCE; COVARION; TREE;
D O I
暂无
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
The probabilistic models used in the inference of phylogenetic trees from molecular data are particularly rich in algebraic structure. This was first noticed 20 years ago when certain polynomials called phylogenetic invariants were introduced by Cavender and Felsenstein, and by Lake. Recently, however, there have been considerable advances in our algebraic understanding of these models. We survey some of this work, indicating both how algebra has been exploited for theoretical understanding and the preliminary steps that have been taken toward its use in practical inference.
引用
收藏
页码:1299 / 1316
页数:18
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